Gene : Cagra.0712s0026 C. grandiflora v1.1
Defline:  (1 of 6) PTHR10168:SF115 - MONOTHIOL GLUTAREDOXIN-S2-RELATED Genomic Order:  26
Name:  ? Cagra.0712s0026 Secondary Identifier:  ? PAC:28899890
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora THIOREDOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0712s0026 0.5kb upstream 0.5kb upstream 1127 true Scaffold712: 94340-95466 Capsella grandiflora
Cagra.0712s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold712: 94967-95466 Capsella grandiflora
Cagra.0712s0026 0.5kb downstream 0.5kb downstream 1127 true Scaffold712: 93840-94966 Capsella grandiflora
Cagra.0712s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold712: 93840-94339 Capsella grandiflora
Cagra.0712s0026 1.0kb upstream 1.0kb upstream 1627 true Scaffold712: 94340-95966 Capsella grandiflora
Cagra.0712s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold712: 94967-95966 Capsella grandiflora
Cagra.0712s0026 1.0kb downstream 1.0kb downstream 1627 true Scaffold712: 93340-94966 Capsella grandiflora
Cagra.0712s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold712: 93340-94339 Capsella grandiflora
Cagra.0712s0026 2.0kb upstream 2.0kb upstream 2627 true Scaffold712: 94340-96966 Capsella grandiflora
Cagra.0712s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold712: 94967-96966 Capsella grandiflora
Cagra.0712s0026 2.0kb downstream 2.0kb downstream 2627 true Scaffold712: 92340-94966 Capsella grandiflora
Cagra.0712s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold712: 92340-94339 Capsella grandiflora
Cagra.0712s0026 5.0kb upstream 5.0kb upstream 5627 true Scaffold712: 94340-99966 Capsella grandiflora
Cagra.0712s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold712: 94967-99966 Capsella grandiflora
Cagra.0712s0026 5.0kb downstream 5.0kb downstream 5627 true Scaffold712: 89340-94966 Capsella grandiflora
Cagra.0712s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold712: 89340-94339 Capsella grandiflora
Cagra.0712s0026 10.0kb upstream 10.0kb upstream 10627 true Scaffold712: 94340-104966 Capsella grandiflora
Cagra.0712s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold712: 94967-104966 Capsella grandiflora
Cagra.0712s0026 10.0kb downstream 10.0kb downstream 10627 true Scaffold712: 84340-94966 Capsella grandiflora
Cagra.0712s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold712: 84340-94339 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378007 5261 Brassicaceae View MSA
123836596 5264 Brassicales-Malvales View MSA
124340857 5266 SBM View MSA
124253911 5268 Malvidae View MSA
124065787 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain