Gene : Cagra.5286s0002 C. grandiflora v1.1
Defline:  (1 of 4) KOG0004 - Ubiquitin/40S ribosomal protein S27a fusion Genomic Order:  2
Name:  ? Cagra.5286s0002 Secondary Identifier:  ? PAC:28895176
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5286s0002 0.5kb upstream 0.5kb upstream 1022 true Scaffold5286: 8607-9628 Capsella grandiflora
Cagra.5286s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5286: 8607-9106 Capsella grandiflora
Cagra.5286s0002 0.5kb downstream 0.5kb downstream 1022 true Scaffold5286: 9107-10128 Capsella grandiflora
Cagra.5286s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5286: 9629-10128 Capsella grandiflora
Cagra.5286s0002 1.0kb upstream 1.0kb upstream 1522 true Scaffold5286: 8107-9628 Capsella grandiflora
Cagra.5286s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5286: 8107-9106 Capsella grandiflora
Cagra.5286s0002 1.0kb downstream 1.0kb downstream 1195 true Scaffold5286: 9107-10301 Capsella grandiflora
Cagra.5286s0002 1.0kb downstream 1.0kb downstream 673 false Scaffold5286: 9629-10301 Capsella grandiflora
Cagra.5286s0002 2.0kb upstream 2.0kb upstream 2522 true Scaffold5286: 7107-9628 Capsella grandiflora
Cagra.5286s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5286: 7107-9106 Capsella grandiflora
Cagra.5286s0002 2.0kb downstream 2.0kb downstream 1195 true Scaffold5286: 9107-10301 Capsella grandiflora
Cagra.5286s0002 2.0kb downstream 2.0kb downstream 673 false Scaffold5286: 9629-10301 Capsella grandiflora
Cagra.5286s0002 5.0kb upstream 5.0kb upstream 5522 true Scaffold5286: 4107-9628 Capsella grandiflora
Cagra.5286s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5286: 4107-9106 Capsella grandiflora
Cagra.5286s0002 5.0kb downstream 5.0kb downstream 1195 true Scaffold5286: 9107-10301 Capsella grandiflora
Cagra.5286s0002 5.0kb downstream 5.0kb downstream 673 false Scaffold5286: 9629-10301 Capsella grandiflora
Cagra.5286s0002 10.0kb upstream 10.0kb upstream 9628 true Scaffold5286: 1-9628 Capsella grandiflora
Cagra.5286s0002 10.0kb upstream 10.0kb upstream 9106 false Scaffold5286: 1-9106 Capsella grandiflora
Cagra.5286s0002 10.0kb downstream 10.0kb downstream 1195 true Scaffold5286: 9107-10301 Capsella grandiflora
Cagra.5286s0002 10.0kb downstream 10.0kb downstream 673 false Scaffold5286: 9629-10301 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
124071531 5270 Rosid View MSA
122344284 5261 Brassicaceae View MSA
123784310 5264 Brassicales-Malvales View MSA
124282499 5266 SBM View MSA
124252072 5268 Malvidae View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain