Gene : Cagra.5118s0020 C. grandiflora v1.1
Defline:  (1 of 9) PTHR13833:SF16 - NHL REPEAT-CONTAINING PROTEIN Genomic Order:  20
Name:  ? Cagra.5118s0020 Secondary Identifier:  ? PAC:28905933
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5118s0020 0.5kb upstream 0.5kb upstream 1298 true Scaffold5118: 82753-84050 Capsella grandiflora
Cagra.5118s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold5118: 82753-83252 Capsella grandiflora
Cagra.5118s0020 0.5kb downstream 0.5kb downstream 1298 true Scaffold5118: 83253-84550 Capsella grandiflora
Cagra.5118s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold5118: 84051-84550 Capsella grandiflora
Cagra.5118s0020 1.0kb upstream 1.0kb upstream 1798 true Scaffold5118: 82253-84050 Capsella grandiflora
Cagra.5118s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold5118: 82253-83252 Capsella grandiflora
Cagra.5118s0020 1.0kb downstream 1.0kb downstream 1798 true Scaffold5118: 83253-85050 Capsella grandiflora
Cagra.5118s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold5118: 84051-85050 Capsella grandiflora
Cagra.5118s0020 2.0kb upstream 2.0kb upstream 2798 true Scaffold5118: 81253-84050 Capsella grandiflora
Cagra.5118s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold5118: 81253-83252 Capsella grandiflora
Cagra.5118s0020 2.0kb downstream 2.0kb downstream 2798 true Scaffold5118: 83253-86050 Capsella grandiflora
Cagra.5118s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold5118: 84051-86050 Capsella grandiflora
Cagra.5118s0020 5.0kb upstream 5.0kb upstream 5798 true Scaffold5118: 78253-84050 Capsella grandiflora
Cagra.5118s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold5118: 78253-83252 Capsella grandiflora
Cagra.5118s0020 5.0kb downstream 5.0kb downstream 5798 true Scaffold5118: 83253-89050 Capsella grandiflora
Cagra.5118s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold5118: 84051-89050 Capsella grandiflora
Cagra.5118s0020 10.0kb upstream 10.0kb upstream 10798 true Scaffold5118: 73253-84050 Capsella grandiflora
Cagra.5118s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold5118: 73253-83252 Capsella grandiflora
Cagra.5118s0020 10.0kb downstream 10.0kb downstream 10798 true Scaffold5118: 83253-94050 Capsella grandiflora
Cagra.5118s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold5118: 84051-94050 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124348216 5266 SBM View MSA
122372674 5261 Brassicaceae View MSA
123837861 5264 Brassicales-Malvales View MSA
124251335 5268 Malvidae View MSA
124070150 5270 Rosid View MSA
123748911 5271 Pentapetalae View MSA
122789586 5272 Eudicot View MSA
122050054 5273 Angiosperm View MSA
121311709 5274 Embryophyte View MSA
123348972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain