Gene : Cagra.0690s0057 C. grandiflora v1.1
Defline:  (1 of 1) PTHR34947:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MJG19 Genomic Order:  57
Name:  ? Cagra.0690s0057 Secondary Identifier:  ? PAC:28893741
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0690s0057 0.5kb upstream 0.5kb upstream 1154 true Scaffold690: 224128-225281 Capsella grandiflora
Cagra.0690s0057 0.5kb upstream 0.5kb upstream 500 false Scaffold690: 224782-225281 Capsella grandiflora
Cagra.0690s0057 0.5kb downstream 0.5kb downstream 1154 true Scaffold690: 223628-224781 Capsella grandiflora
Cagra.0690s0057 0.5kb downstream 0.5kb downstream 500 false Scaffold690: 223628-224127 Capsella grandiflora
Cagra.0690s0057 1.0kb upstream 1.0kb upstream 1654 true Scaffold690: 224128-225781 Capsella grandiflora
Cagra.0690s0057 1.0kb upstream 1.0kb upstream 1000 false Scaffold690: 224782-225781 Capsella grandiflora
Cagra.0690s0057 1.0kb downstream 1.0kb downstream 1654 true Scaffold690: 223128-224781 Capsella grandiflora
Cagra.0690s0057 1.0kb downstream 1.0kb downstream 1000 false Scaffold690: 223128-224127 Capsella grandiflora
Cagra.0690s0057 2.0kb upstream 2.0kb upstream 2654 true Scaffold690: 224128-226781 Capsella grandiflora
Cagra.0690s0057 2.0kb upstream 2.0kb upstream 2000 false Scaffold690: 224782-226781 Capsella grandiflora
Cagra.0690s0057 2.0kb downstream 2.0kb downstream 2654 true Scaffold690: 222128-224781 Capsella grandiflora
Cagra.0690s0057 2.0kb downstream 2.0kb downstream 2000 false Scaffold690: 222128-224127 Capsella grandiflora
Cagra.0690s0057 5.0kb upstream 5.0kb upstream 5654 true Scaffold690: 224128-229781 Capsella grandiflora
Cagra.0690s0057 5.0kb upstream 5.0kb upstream 5000 false Scaffold690: 224782-229781 Capsella grandiflora
Cagra.0690s0057 5.0kb downstream 5.0kb downstream 5654 true Scaffold690: 219128-224781 Capsella grandiflora
Cagra.0690s0057 5.0kb downstream 5.0kb downstream 5000 false Scaffold690: 219128-224127 Capsella grandiflora
Cagra.0690s0057 10.0kb upstream 10.0kb upstream 5657 true Scaffold690: 224128-229784 Capsella grandiflora
Cagra.0690s0057 10.0kb upstream 10.0kb upstream 5003 false Scaffold690: 224782-229784 Capsella grandiflora
Cagra.0690s0057 10.0kb downstream 10.0kb downstream 10654 true Scaffold690: 214128-224781 Capsella grandiflora
Cagra.0690s0057 10.0kb downstream 10.0kb downstream 10000 false Scaffold690: 214128-224127 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378414 5261 Brassicaceae View MSA
123836798 5264 Brassicales-Malvales View MSA
124349840 5266 SBM View MSA
124250915 5268 Malvidae View MSA
124070345 5270 Rosid View MSA
123746595 5271 Pentapetalae View MSA
122789663 5272 Eudicot View MSA
122050891 5273 Angiosperm View MSA
121312190 5274 Embryophyte View MSA
123349389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain