Gene : Cagra.0690s0055 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  55
Name:  ? Cagra.0690s0055 Secondary Identifier:  ? PAC:28893801
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0690s0055 0.5kb upstream 0.5kb upstream 2325 true Scaffold690: 217233-219557 Capsella grandiflora
Cagra.0690s0055 0.5kb upstream 0.5kb upstream 500 false Scaffold690: 217233-217732 Capsella grandiflora
Cagra.0690s0055 0.5kb downstream 0.5kb downstream 2325 true Scaffold690: 217733-220057 Capsella grandiflora
Cagra.0690s0055 0.5kb downstream 0.5kb downstream 500 false Scaffold690: 219558-220057 Capsella grandiflora
Cagra.0690s0055 1.0kb upstream 1.0kb upstream 2825 true Scaffold690: 216733-219557 Capsella grandiflora
Cagra.0690s0055 1.0kb upstream 1.0kb upstream 1000 false Scaffold690: 216733-217732 Capsella grandiflora
Cagra.0690s0055 1.0kb downstream 1.0kb downstream 2825 true Scaffold690: 217733-220557 Capsella grandiflora
Cagra.0690s0055 1.0kb downstream 1.0kb downstream 1000 false Scaffold690: 219558-220557 Capsella grandiflora
Cagra.0690s0055 2.0kb upstream 2.0kb upstream 3825 true Scaffold690: 215733-219557 Capsella grandiflora
Cagra.0690s0055 2.0kb upstream 2.0kb upstream 2000 false Scaffold690: 215733-217732 Capsella grandiflora
Cagra.0690s0055 2.0kb downstream 2.0kb downstream 3825 true Scaffold690: 217733-221557 Capsella grandiflora
Cagra.0690s0055 2.0kb downstream 2.0kb downstream 2000 false Scaffold690: 219558-221557 Capsella grandiflora
Cagra.0690s0055 5.0kb upstream 5.0kb upstream 6825 true Scaffold690: 212733-219557 Capsella grandiflora
Cagra.0690s0055 5.0kb upstream 5.0kb upstream 5000 false Scaffold690: 212733-217732 Capsella grandiflora
Cagra.0690s0055 5.0kb downstream 5.0kb downstream 6825 true Scaffold690: 217733-224557 Capsella grandiflora
Cagra.0690s0055 5.0kb downstream 5.0kb downstream 5000 false Scaffold690: 219558-224557 Capsella grandiflora
Cagra.0690s0055 10.0kb upstream 10.0kb upstream 11825 true Scaffold690: 207733-219557 Capsella grandiflora
Cagra.0690s0055 10.0kb upstream 10.0kb upstream 10000 false Scaffold690: 207733-217732 Capsella grandiflora
Cagra.0690s0055 10.0kb downstream 10.0kb downstream 11825 true Scaffold690: 217733-229557 Capsella grandiflora
Cagra.0690s0055 10.0kb downstream 10.0kb downstream 10000 false Scaffold690: 219558-229557 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375029 5261 Brassicaceae View MSA
123838641 5264 Brassicales-Malvales View MSA
124322483 5266 SBM View MSA
124244807 5268 Malvidae View MSA
124071286 5270 Rosid View MSA
123743446 5271 Pentapetalae View MSA
122788248 5272 Eudicot View MSA
122047755 5273 Angiosperm View MSA
121310787 5274 Embryophyte View MSA
123348188 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain