Gene : Cagra.0690s0054 C. grandiflora v1.1
Defline:  (1 of 410) PF13041 - PPR repeat family (PPR_2) Genomic Order:  54
Name:  ? Cagra.0690s0054 Secondary Identifier:  ? PAC:28893750
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0690s0054 0.5kb upstream 0.5kb upstream 1685 true Scaffold690: 215697-217381 Capsella grandiflora
Cagra.0690s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold690: 215697-216196 Capsella grandiflora
Cagra.0690s0054 0.5kb downstream 0.5kb downstream 1685 true Scaffold690: 216197-217881 Capsella grandiflora
Cagra.0690s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold690: 217382-217881 Capsella grandiflora
Cagra.0690s0054 1.0kb upstream 1.0kb upstream 2185 true Scaffold690: 215197-217381 Capsella grandiflora
Cagra.0690s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold690: 215197-216196 Capsella grandiflora
Cagra.0690s0054 1.0kb downstream 1.0kb downstream 2185 true Scaffold690: 216197-218381 Capsella grandiflora
Cagra.0690s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold690: 217382-218381 Capsella grandiflora
Cagra.0690s0054 2.0kb upstream 2.0kb upstream 3185 true Scaffold690: 214197-217381 Capsella grandiflora
Cagra.0690s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold690: 214197-216196 Capsella grandiflora
Cagra.0690s0054 2.0kb downstream 2.0kb downstream 3185 true Scaffold690: 216197-219381 Capsella grandiflora
Cagra.0690s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold690: 217382-219381 Capsella grandiflora
Cagra.0690s0054 5.0kb upstream 5.0kb upstream 6185 true Scaffold690: 211197-217381 Capsella grandiflora
Cagra.0690s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold690: 211197-216196 Capsella grandiflora
Cagra.0690s0054 5.0kb downstream 5.0kb downstream 6185 true Scaffold690: 216197-222381 Capsella grandiflora
Cagra.0690s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold690: 217382-222381 Capsella grandiflora
Cagra.0690s0054 10.0kb upstream 10.0kb upstream 11185 true Scaffold690: 206197-217381 Capsella grandiflora
Cagra.0690s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold690: 206197-216196 Capsella grandiflora
Cagra.0690s0054 10.0kb downstream 10.0kb downstream 11185 true Scaffold690: 216197-227381 Capsella grandiflora
Cagra.0690s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold690: 217382-227381 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374696 5261 Brassicaceae View MSA
123835608 5264 Brassicales-Malvales View MSA
124339441 5266 SBM View MSA
124239127 5268 Malvidae View MSA
124063725 5270 Rosid View MSA
123743446 5271 Pentapetalae View MSA
122788248 5272 Eudicot View MSA
122047755 5273 Angiosperm View MSA
121310787 5274 Embryophyte View MSA
123348188 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain