Gene : Cagra.5131s0003 C. grandiflora v1.1
Defline:  (1 of 3) PF09320 - Domain of unknown function (DUF1977) (DUF1977) Genomic Order:  3
Name:  ? Cagra.5131s0003 Secondary Identifier:  ? PAC:28908145
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5131s0003 0.5kb upstream 0.5kb upstream 1922 true Scaffold5131: 10972-12893 Capsella grandiflora
Cagra.5131s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5131: 10972-11471 Capsella grandiflora
Cagra.5131s0003 0.5kb downstream 0.5kb downstream 1922 true Scaffold5131: 11472-13393 Capsella grandiflora
Cagra.5131s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5131: 12894-13393 Capsella grandiflora
Cagra.5131s0003 1.0kb upstream 1.0kb upstream 2422 true Scaffold5131: 10472-12893 Capsella grandiflora
Cagra.5131s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5131: 10472-11471 Capsella grandiflora
Cagra.5131s0003 1.0kb downstream 1.0kb downstream 2422 true Scaffold5131: 11472-13893 Capsella grandiflora
Cagra.5131s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5131: 12894-13893 Capsella grandiflora
Cagra.5131s0003 2.0kb upstream 2.0kb upstream 3422 true Scaffold5131: 9472-12893 Capsella grandiflora
Cagra.5131s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5131: 9472-11471 Capsella grandiflora
Cagra.5131s0003 2.0kb downstream 2.0kb downstream 3422 true Scaffold5131: 11472-14893 Capsella grandiflora
Cagra.5131s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5131: 12894-14893 Capsella grandiflora
Cagra.5131s0003 5.0kb upstream 5.0kb upstream 6422 true Scaffold5131: 6472-12893 Capsella grandiflora
Cagra.5131s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5131: 6472-11471 Capsella grandiflora
Cagra.5131s0003 5.0kb downstream 5.0kb downstream 6422 true Scaffold5131: 11472-17893 Capsella grandiflora
Cagra.5131s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5131: 12894-17893 Capsella grandiflora
Cagra.5131s0003 10.0kb upstream 10.0kb upstream 11422 true Scaffold5131: 1472-12893 Capsella grandiflora
Cagra.5131s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold5131: 1472-11471 Capsella grandiflora
Cagra.5131s0003 10.0kb downstream 10.0kb downstream 11422 true Scaffold5131: 11472-22893 Capsella grandiflora
Cagra.5131s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold5131: 12894-22893 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379532 5261 Brassicaceae View MSA
123837757 5264 Brassicales-Malvales View MSA
124341110 5266 SBM View MSA
124241790 5268 Malvidae View MSA
124061227 5270 Rosid View MSA
123743637 5271 Pentapetalae View MSA
122792301 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain