Gene : Cagra.0701s0016 C. grandiflora v1.1
Defline:  (1 of 228) PF13855 - Leucine rich repeat (LRR_8) Genomic Order:  16
Name:  ? Cagra.0701s0016 Secondary Identifier:  ? PAC:28913792
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0701s0016 0.5kb upstream 0.5kb upstream 1784 true Scaffold701: 48371-50154 Capsella grandiflora
Cagra.0701s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold701: 48371-48870 Capsella grandiflora
Cagra.0701s0016 0.5kb downstream 0.5kb downstream 1784 true Scaffold701: 48871-50654 Capsella grandiflora
Cagra.0701s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold701: 50155-50654 Capsella grandiflora
Cagra.0701s0016 1.0kb upstream 1.0kb upstream 2284 true Scaffold701: 47871-50154 Capsella grandiflora
Cagra.0701s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold701: 47871-48870 Capsella grandiflora
Cagra.0701s0016 1.0kb downstream 1.0kb downstream 2284 true Scaffold701: 48871-51154 Capsella grandiflora
Cagra.0701s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold701: 50155-51154 Capsella grandiflora
Cagra.0701s0016 2.0kb upstream 2.0kb upstream 3284 true Scaffold701: 46871-50154 Capsella grandiflora
Cagra.0701s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold701: 46871-48870 Capsella grandiflora
Cagra.0701s0016 2.0kb downstream 2.0kb downstream 3284 true Scaffold701: 48871-52154 Capsella grandiflora
Cagra.0701s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold701: 50155-52154 Capsella grandiflora
Cagra.0701s0016 5.0kb upstream 5.0kb upstream 6284 true Scaffold701: 43871-50154 Capsella grandiflora
Cagra.0701s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold701: 43871-48870 Capsella grandiflora
Cagra.0701s0016 5.0kb downstream 5.0kb downstream 6284 true Scaffold701: 48871-55154 Capsella grandiflora
Cagra.0701s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold701: 50155-55154 Capsella grandiflora
Cagra.0701s0016 10.0kb upstream 10.0kb upstream 11284 true Scaffold701: 38871-50154 Capsella grandiflora
Cagra.0701s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold701: 38871-48870 Capsella grandiflora
Cagra.0701s0016 10.0kb downstream 10.0kb downstream 11284 true Scaffold701: 48871-60154 Capsella grandiflora
Cagra.0701s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold701: 50155-60154 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372303 5261 Brassicaceae View MSA
123800332 5264 Brassicales-Malvales View MSA
124350581 5266 SBM View MSA
124254554 5268 Malvidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain