Gene : Cagra.0706s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12565:SF74 - TRANSCRIPTION FACTOR HEC1 Genomic Order:  9
Name:  ? Cagra.0706s0009 Secondary Identifier:  ? PAC:28912355
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0706s0009 0.5kb upstream 0.5kb upstream 1199 true Scaffold706: 39718-40916 Capsella grandiflora
Cagra.0706s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold706: 40417-40916 Capsella grandiflora
Cagra.0706s0009 0.5kb downstream 0.5kb downstream 1199 true Scaffold706: 39218-40416 Capsella grandiflora
Cagra.0706s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold706: 39218-39717 Capsella grandiflora
Cagra.0706s0009 1.0kb upstream 1.0kb upstream 1699 true Scaffold706: 39718-41416 Capsella grandiflora
Cagra.0706s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold706: 40417-41416 Capsella grandiflora
Cagra.0706s0009 1.0kb downstream 1.0kb downstream 1699 true Scaffold706: 38718-40416 Capsella grandiflora
Cagra.0706s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold706: 38718-39717 Capsella grandiflora
Cagra.0706s0009 2.0kb upstream 2.0kb upstream 2699 true Scaffold706: 39718-42416 Capsella grandiflora
Cagra.0706s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold706: 40417-42416 Capsella grandiflora
Cagra.0706s0009 2.0kb downstream 2.0kb downstream 2699 true Scaffold706: 37718-40416 Capsella grandiflora
Cagra.0706s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold706: 37718-39717 Capsella grandiflora
Cagra.0706s0009 5.0kb upstream 5.0kb upstream 5699 true Scaffold706: 39718-45416 Capsella grandiflora
Cagra.0706s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold706: 40417-45416 Capsella grandiflora
Cagra.0706s0009 5.0kb downstream 5.0kb downstream 5699 true Scaffold706: 34718-40416 Capsella grandiflora
Cagra.0706s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold706: 34718-39717 Capsella grandiflora
Cagra.0706s0009 10.0kb upstream 10.0kb upstream 10699 true Scaffold706: 39718-50416 Capsella grandiflora
Cagra.0706s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold706: 40417-50416 Capsella grandiflora
Cagra.0706s0009 10.0kb downstream 10.0kb downstream 10699 true Scaffold706: 29718-40416 Capsella grandiflora
Cagra.0706s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold706: 29718-39717 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360554 5261 Brassicaceae View MSA
123837736 5264 Brassicales-Malvales View MSA
124350383 5266 SBM View MSA
124250607 5268 Malvidae View MSA
124070327 5270 Rosid View MSA
123745456 5271 Pentapetalae View MSA
122795730 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain