Gene : Cagra.0686s0024 C. grandiflora v1.1
Defline:  (1 of 43) PF13912 - C2H2-type zinc finger (zf-C2H2_6) Genomic Order:  24
Name:  ? Cagra.0686s0024 Secondary Identifier:  ? PAC:28901031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0686s0024 0.5kb upstream 0.5kb upstream 1268 true Scaffold686: 84856-86123 Capsella grandiflora
Cagra.0686s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold686: 85624-86123 Capsella grandiflora
Cagra.0686s0024 0.5kb downstream 0.5kb downstream 1268 true Scaffold686: 84356-85623 Capsella grandiflora
Cagra.0686s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold686: 84356-84855 Capsella grandiflora
Cagra.0686s0024 1.0kb upstream 1.0kb upstream 1768 true Scaffold686: 84856-86623 Capsella grandiflora
Cagra.0686s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold686: 85624-86623 Capsella grandiflora
Cagra.0686s0024 1.0kb downstream 1.0kb downstream 1768 true Scaffold686: 83856-85623 Capsella grandiflora
Cagra.0686s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold686: 83856-84855 Capsella grandiflora
Cagra.0686s0024 2.0kb upstream 2.0kb upstream 2768 true Scaffold686: 84856-87623 Capsella grandiflora
Cagra.0686s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold686: 85624-87623 Capsella grandiflora
Cagra.0686s0024 2.0kb downstream 2.0kb downstream 2768 true Scaffold686: 82856-85623 Capsella grandiflora
Cagra.0686s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold686: 82856-84855 Capsella grandiflora
Cagra.0686s0024 5.0kb upstream 5.0kb upstream 5768 true Scaffold686: 84856-90623 Capsella grandiflora
Cagra.0686s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold686: 85624-90623 Capsella grandiflora
Cagra.0686s0024 5.0kb downstream 5.0kb downstream 5768 true Scaffold686: 79856-85623 Capsella grandiflora
Cagra.0686s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold686: 79856-84855 Capsella grandiflora
Cagra.0686s0024 10.0kb upstream 10.0kb upstream 10768 true Scaffold686: 84856-95623 Capsella grandiflora
Cagra.0686s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold686: 85624-95623 Capsella grandiflora
Cagra.0686s0024 10.0kb downstream 10.0kb downstream 10768 true Scaffold686: 74856-85623 Capsella grandiflora
Cagra.0686s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold686: 74856-84855 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371824 5261 Brassicaceae View MSA
123841655 5264 Brassicales-Malvales View MSA
124344163 5266 SBM View MSA
124241101 5268 Malvidae View MSA
124068239 5270 Rosid View MSA
123744068 5271 Pentapetalae View MSA
122791696 5272 Eudicot View MSA
122047556 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain