Gene : Cagra.5072s0001 C. grandiflora v1.1
Defline:  (1 of 24) PF05498 - Rapid ALkalinization Factor (RALF) (RALF) Genomic Order:  1
Name:  ? Cagra.5072s0001 Secondary Identifier:  ? PAC:28909993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5072s0001 0.5kb upstream 0.5kb upstream 746 true Scaffold5072: 6-751 Capsella grandiflora
Cagra.5072s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5072: 252-751 Capsella grandiflora
Cagra.5072s0001 0.5kb downstream 0.5kb downstream 251 true Scaffold5072: 1-251 Capsella grandiflora
Cagra.5072s0001 0.5kb downstream 0.5kb downstream 5 false Scaffold5072: 1-5 Capsella grandiflora
Cagra.5072s0001 1.0kb upstream 1.0kb upstream 1246 true Scaffold5072: 6-1251 Capsella grandiflora
Cagra.5072s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5072: 252-1251 Capsella grandiflora
Cagra.5072s0001 1.0kb downstream 1.0kb downstream 251 true Scaffold5072: 1-251 Capsella grandiflora
Cagra.5072s0001 1.0kb downstream 1.0kb downstream 5 false Scaffold5072: 1-5 Capsella grandiflora
Cagra.5072s0001 2.0kb upstream 2.0kb upstream 1794 true Scaffold5072: 6-1799 Capsella grandiflora
Cagra.5072s0001 2.0kb upstream 2.0kb upstream 1548 false Scaffold5072: 252-1799 Capsella grandiflora
Cagra.5072s0001 2.0kb downstream 2.0kb downstream 251 true Scaffold5072: 1-251 Capsella grandiflora
Cagra.5072s0001 2.0kb downstream 2.0kb downstream 5 false Scaffold5072: 1-5 Capsella grandiflora
Cagra.5072s0001 5.0kb upstream 5.0kb upstream 1794 true Scaffold5072: 6-1799 Capsella grandiflora
Cagra.5072s0001 5.0kb upstream 5.0kb upstream 1548 false Scaffold5072: 252-1799 Capsella grandiflora
Cagra.5072s0001 5.0kb downstream 5.0kb downstream 251 true Scaffold5072: 1-251 Capsella grandiflora
Cagra.5072s0001 5.0kb downstream 5.0kb downstream 5 false Scaffold5072: 1-5 Capsella grandiflora
Cagra.5072s0001 10.0kb upstream 10.0kb upstream 1794 true Scaffold5072: 6-1799 Capsella grandiflora
Cagra.5072s0001 10.0kb upstream 10.0kb upstream 1548 false Scaffold5072: 252-1799 Capsella grandiflora
Cagra.5072s0001 10.0kb downstream 10.0kb downstream 251 true Scaffold5072: 1-251 Capsella grandiflora
Cagra.5072s0001 10.0kb downstream 10.0kb downstream 5 false Scaffold5072: 1-5 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792188 5273 Angiosperm View MSA
122380534 5261 Brassicaceae View MSA
123802769 5264 Brassicales-Malvales View MSA
124299936 5266 SBM View MSA
124254551 5268 Malvidae View MSA
124038034 5270 Rosid View MSA
123610618 5271 Pentapetalae View MSA
122796858 5272 Eudicot View MSA
121063434 5274 Embryophyte View MSA
123103183 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain