Gene : Cagra.5557s0006 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31241:SF2 - DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED Genomic Order:  6
Name:  ? Cagra.5557s0006 Secondary Identifier:  ? PAC:28911911
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5557s0006 0.5kb upstream 0.5kb upstream 1289 true Scaffold5557: 20349-21637 Capsella grandiflora
Cagra.5557s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold5557: 20349-20848 Capsella grandiflora
Cagra.5557s0006 0.5kb downstream 0.5kb downstream 1289 true Scaffold5557: 20849-22137 Capsella grandiflora
Cagra.5557s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold5557: 21638-22137 Capsella grandiflora
Cagra.5557s0006 1.0kb upstream 1.0kb upstream 1789 true Scaffold5557: 19849-21637 Capsella grandiflora
Cagra.5557s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold5557: 19849-20848 Capsella grandiflora
Cagra.5557s0006 1.0kb downstream 1.0kb downstream 1789 true Scaffold5557: 20849-22637 Capsella grandiflora
Cagra.5557s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold5557: 21638-22637 Capsella grandiflora
Cagra.5557s0006 2.0kb upstream 2.0kb upstream 2789 true Scaffold5557: 18849-21637 Capsella grandiflora
Cagra.5557s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold5557: 18849-20848 Capsella grandiflora
Cagra.5557s0006 2.0kb downstream 2.0kb downstream 2789 true Scaffold5557: 20849-23637 Capsella grandiflora
Cagra.5557s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold5557: 21638-23637 Capsella grandiflora
Cagra.5557s0006 5.0kb upstream 5.0kb upstream 5789 true Scaffold5557: 15849-21637 Capsella grandiflora
Cagra.5557s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold5557: 15849-20848 Capsella grandiflora
Cagra.5557s0006 5.0kb downstream 5.0kb downstream 5789 true Scaffold5557: 20849-26637 Capsella grandiflora
Cagra.5557s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold5557: 21638-26637 Capsella grandiflora
Cagra.5557s0006 10.0kb upstream 10.0kb upstream 10789 true Scaffold5557: 10849-21637 Capsella grandiflora
Cagra.5557s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold5557: 10849-20848 Capsella grandiflora
Cagra.5557s0006 10.0kb downstream 10.0kb downstream 10789 true Scaffold5557: 20849-31637 Capsella grandiflora
Cagra.5557s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold5557: 21638-31637 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370314 5261 Brassicaceae View MSA
123799938 5264 Brassicales-Malvales View MSA
124297406 5266 SBM View MSA
124149308 5268 Malvidae View MSA
124068554 5270 Rosid View MSA
123752289 5271 Pentapetalae View MSA
122797550 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain