Gene : Cagra.5575s0001 C. grandiflora v1.1
Defline:  (1 of 34) PTHR31232:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATED Genomic Order:  1
Name:  ? Cagra.5575s0001 Secondary Identifier:  ? PAC:28903654
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5575s0001 0.5kb upstream 0.5kb upstream 914 true Scaffold5575: 252-1165 Capsella grandiflora
Cagra.5575s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5575: 252-751 Capsella grandiflora
Cagra.5575s0001 0.5kb downstream 0.5kb downstream 914 true Scaffold5575: 752-1665 Capsella grandiflora
Cagra.5575s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5575: 1166-1665 Capsella grandiflora
Cagra.5575s0001 1.0kb upstream 1.0kb upstream 1165 true Scaffold5575: 1-1165 Capsella grandiflora
Cagra.5575s0001 1.0kb upstream 1.0kb upstream 751 false Scaffold5575: 1-751 Capsella grandiflora
Cagra.5575s0001 1.0kb downstream 1.0kb downstream 1414 true Scaffold5575: 752-2165 Capsella grandiflora
Cagra.5575s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5575: 1166-2165 Capsella grandiflora
Cagra.5575s0001 2.0kb upstream 2.0kb upstream 1165 true Scaffold5575: 1-1165 Capsella grandiflora
Cagra.5575s0001 2.0kb upstream 2.0kb upstream 751 false Scaffold5575: 1-751 Capsella grandiflora
Cagra.5575s0001 2.0kb downstream 2.0kb downstream 2414 true Scaffold5575: 752-3165 Capsella grandiflora
Cagra.5575s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5575: 1166-3165 Capsella grandiflora
Cagra.5575s0001 5.0kb upstream 5.0kb upstream 1165 true Scaffold5575: 1-1165 Capsella grandiflora
Cagra.5575s0001 5.0kb upstream 5.0kb upstream 751 false Scaffold5575: 1-751 Capsella grandiflora
Cagra.5575s0001 5.0kb downstream 5.0kb downstream 5414 true Scaffold5575: 752-6165 Capsella grandiflora
Cagra.5575s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5575: 1166-6165 Capsella grandiflora
Cagra.5575s0001 10.0kb upstream 10.0kb upstream 1165 true Scaffold5575: 1-1165 Capsella grandiflora
Cagra.5575s0001 10.0kb upstream 10.0kb upstream 751 false Scaffold5575: 1-751 Capsella grandiflora
Cagra.5575s0001 10.0kb downstream 10.0kb downstream 10414 true Scaffold5575: 752-11165 Capsella grandiflora
Cagra.5575s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5575: 1166-11165 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512059 5273 Angiosperm View MSA
122380220 5261 Brassicaceae View MSA
123802607 5264 Brassicales-Malvales View MSA
124299789 5266 SBM View MSA
124151113 5268 Malvidae View MSA
123876618 5270 Rosid View MSA
123460272 5271 Pentapetalae View MSA
122495649 5272 Eudicot View MSA
120785085 5274 Embryophyte View MSA
122826958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain