Gene : Cagra.5588s0018 C. grandiflora v1.1
Defline:  (1 of 1) PTHR16007//PTHR16007:SF13 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  18
Name:  ? Cagra.5588s0018 Secondary Identifier:  ? PAC:28914600
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5588s0018 0.5kb upstream 0.5kb upstream 1430 true Scaffold5588: 55612-57041 Capsella grandiflora
Cagra.5588s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold5588: 56542-57041 Capsella grandiflora
Cagra.5588s0018 0.5kb downstream 0.5kb downstream 1430 true Scaffold5588: 55112-56541 Capsella grandiflora
Cagra.5588s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold5588: 55112-55611 Capsella grandiflora
Cagra.5588s0018 1.0kb upstream 1.0kb upstream 1930 true Scaffold5588: 55612-57541 Capsella grandiflora
Cagra.5588s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold5588: 56542-57541 Capsella grandiflora
Cagra.5588s0018 1.0kb downstream 1.0kb downstream 1930 true Scaffold5588: 54612-56541 Capsella grandiflora
Cagra.5588s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold5588: 54612-55611 Capsella grandiflora
Cagra.5588s0018 2.0kb upstream 2.0kb upstream 2930 true Scaffold5588: 55612-58541 Capsella grandiflora
Cagra.5588s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold5588: 56542-58541 Capsella grandiflora
Cagra.5588s0018 2.0kb downstream 2.0kb downstream 2930 true Scaffold5588: 53612-56541 Capsella grandiflora
Cagra.5588s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold5588: 53612-55611 Capsella grandiflora
Cagra.5588s0018 5.0kb upstream 5.0kb upstream 5930 true Scaffold5588: 55612-61541 Capsella grandiflora
Cagra.5588s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold5588: 56542-61541 Capsella grandiflora
Cagra.5588s0018 5.0kb downstream 5.0kb downstream 5930 true Scaffold5588: 50612-56541 Capsella grandiflora
Cagra.5588s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold5588: 50612-55611 Capsella grandiflora
Cagra.5588s0018 10.0kb upstream 10.0kb upstream 10930 true Scaffold5588: 55612-66541 Capsella grandiflora
Cagra.5588s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold5588: 56542-66541 Capsella grandiflora
Cagra.5588s0018 10.0kb downstream 10.0kb downstream 10930 true Scaffold5588: 45612-56541 Capsella grandiflora
Cagra.5588s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold5588: 45612-55611 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041247 5273 Angiosperm View MSA
122374752 5261 Brassicaceae View MSA
123829811 5264 Brassicales-Malvales View MSA
124337366 5266 SBM View MSA
124241579 5268 Malvidae View MSA
124063633 5270 Rosid View MSA
123742298 5271 Pentapetalae View MSA
122794517 5272 Eudicot View MSA
121344205 5274 Embryophyte View MSA
123380001 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain