Gene : Cagra.5588s0020 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31677:SF5 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP Genomic Order:  20
Name:  ? Cagra.5588s0020 Secondary Identifier:  ? PAC:28914593
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5588s0020 0.5kb upstream 0.5kb upstream 1136 true Scaffold5588: 58081-59216 Capsella grandiflora
Cagra.5588s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold5588: 58717-59216 Capsella grandiflora
Cagra.5588s0020 0.5kb downstream 0.5kb downstream 1136 true Scaffold5588: 57581-58716 Capsella grandiflora
Cagra.5588s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold5588: 57581-58080 Capsella grandiflora
Cagra.5588s0020 1.0kb upstream 1.0kb upstream 1636 true Scaffold5588: 58081-59716 Capsella grandiflora
Cagra.5588s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold5588: 58717-59716 Capsella grandiflora
Cagra.5588s0020 1.0kb downstream 1.0kb downstream 1636 true Scaffold5588: 57081-58716 Capsella grandiflora
Cagra.5588s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold5588: 57081-58080 Capsella grandiflora
Cagra.5588s0020 2.0kb upstream 2.0kb upstream 2636 true Scaffold5588: 58081-60716 Capsella grandiflora
Cagra.5588s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold5588: 58717-60716 Capsella grandiflora
Cagra.5588s0020 2.0kb downstream 2.0kb downstream 2636 true Scaffold5588: 56081-58716 Capsella grandiflora
Cagra.5588s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold5588: 56081-58080 Capsella grandiflora
Cagra.5588s0020 5.0kb upstream 5.0kb upstream 5636 true Scaffold5588: 58081-63716 Capsella grandiflora
Cagra.5588s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold5588: 58717-63716 Capsella grandiflora
Cagra.5588s0020 5.0kb downstream 5.0kb downstream 5636 true Scaffold5588: 53081-58716 Capsella grandiflora
Cagra.5588s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold5588: 53081-58080 Capsella grandiflora
Cagra.5588s0020 10.0kb upstream 10.0kb upstream 10636 true Scaffold5588: 58081-68716 Capsella grandiflora
Cagra.5588s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold5588: 58717-68716 Capsella grandiflora
Cagra.5588s0020 10.0kb downstream 10.0kb downstream 10636 true Scaffold5588: 48081-58716 Capsella grandiflora
Cagra.5588s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold5588: 48081-58080 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377368 5261 Brassicaceae View MSA
123840869 5264 Brassicales-Malvales View MSA
124347064 5266 SBM View MSA
124251751 5268 Malvidae View MSA
124065469 5270 Rosid View MSA
123753503 5271 Pentapetalae View MSA
122795493 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain