Gene : Cagra.0799s0080 C. grandiflora v1.1
Defline:  (1 of 2) 2.1.1.142 - Cycloartenol 24-C-methyltransferase / Sterol C-methyltransferase Genomic Order:  80
Name:  ? Cagra.0799s0080 Secondary Identifier:  ? PAC:28899040
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-2541 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0799s0080 0.5kb upstream 0.5kb upstream 1583 true Scaffold799: 315519-317101 Capsella grandiflora
Cagra.0799s0080 0.5kb upstream 0.5kb upstream 500 false Scaffold799: 316602-317101 Capsella grandiflora
Cagra.0799s0080 0.5kb downstream 0.5kb downstream 1583 true Scaffold799: 315019-316601 Capsella grandiflora
Cagra.0799s0080 0.5kb downstream 0.5kb downstream 500 false Scaffold799: 315019-315518 Capsella grandiflora
Cagra.0799s0080 1.0kb upstream 1.0kb upstream 2083 true Scaffold799: 315519-317601 Capsella grandiflora
Cagra.0799s0080 1.0kb upstream 1.0kb upstream 1000 false Scaffold799: 316602-317601 Capsella grandiflora
Cagra.0799s0080 1.0kb downstream 1.0kb downstream 2083 true Scaffold799: 314519-316601 Capsella grandiflora
Cagra.0799s0080 1.0kb downstream 1.0kb downstream 1000 false Scaffold799: 314519-315518 Capsella grandiflora
Cagra.0799s0080 2.0kb upstream 2.0kb upstream 3083 true Scaffold799: 315519-318601 Capsella grandiflora
Cagra.0799s0080 2.0kb upstream 2.0kb upstream 2000 false Scaffold799: 316602-318601 Capsella grandiflora
Cagra.0799s0080 2.0kb downstream 2.0kb downstream 3083 true Scaffold799: 313519-316601 Capsella grandiflora
Cagra.0799s0080 2.0kb downstream 2.0kb downstream 2000 false Scaffold799: 313519-315518 Capsella grandiflora
Cagra.0799s0080 5.0kb upstream 5.0kb upstream 6083 true Scaffold799: 315519-321601 Capsella grandiflora
Cagra.0799s0080 5.0kb upstream 5.0kb upstream 5000 false Scaffold799: 316602-321601 Capsella grandiflora
Cagra.0799s0080 5.0kb downstream 5.0kb downstream 6083 true Scaffold799: 310519-316601 Capsella grandiflora
Cagra.0799s0080 5.0kb downstream 5.0kb downstream 5000 false Scaffold799: 310519-315518 Capsella grandiflora
Cagra.0799s0080 10.0kb upstream 10.0kb upstream 11083 true Scaffold799: 315519-326601 Capsella grandiflora
Cagra.0799s0080 10.0kb upstream 10.0kb upstream 10000 false Scaffold799: 316602-326601 Capsella grandiflora
Cagra.0799s0080 10.0kb downstream 10.0kb downstream 11083 true Scaffold799: 305519-316601 Capsella grandiflora
Cagra.0799s0080 10.0kb downstream 10.0kb downstream 10000 false Scaffold799: 305519-315518 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362317 5261 Brassicaceae View MSA
123838887 5264 Brassicales-Malvales View MSA
124346490 5266 SBM View MSA
124253905 5268 Malvidae View MSA
124062821 5270 Rosid View MSA
123749878 5271 Pentapetalae View MSA
122793633 5272 Eudicot View MSA
122047271 5273 Angiosperm View MSA
121344259 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain