Gene : Cagra.0787s0004 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10042 - EARLY GROWTH RESPONSE PROTEIN-RELATED Genomic Order:  4
Name:  ? Cagra.0787s0004 Secondary Identifier:  ? PAC:28895286
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0787s0004 0.5kb upstream 0.5kb upstream 1016 true Scaffold787: 32513-33528 Capsella grandiflora
Cagra.0787s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold787: 33029-33528 Capsella grandiflora
Cagra.0787s0004 0.5kb downstream 0.5kb downstream 1016 true Scaffold787: 32013-33028 Capsella grandiflora
Cagra.0787s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold787: 32013-32512 Capsella grandiflora
Cagra.0787s0004 1.0kb upstream 1.0kb upstream 1516 true Scaffold787: 32513-34028 Capsella grandiflora
Cagra.0787s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold787: 33029-34028 Capsella grandiflora
Cagra.0787s0004 1.0kb downstream 1.0kb downstream 1516 true Scaffold787: 31513-33028 Capsella grandiflora
Cagra.0787s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold787: 31513-32512 Capsella grandiflora
Cagra.0787s0004 2.0kb upstream 2.0kb upstream 2516 true Scaffold787: 32513-35028 Capsella grandiflora
Cagra.0787s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold787: 33029-35028 Capsella grandiflora
Cagra.0787s0004 2.0kb downstream 2.0kb downstream 2516 true Scaffold787: 30513-33028 Capsella grandiflora
Cagra.0787s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold787: 30513-32512 Capsella grandiflora
Cagra.0787s0004 5.0kb upstream 5.0kb upstream 5516 true Scaffold787: 32513-38028 Capsella grandiflora
Cagra.0787s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold787: 33029-38028 Capsella grandiflora
Cagra.0787s0004 5.0kb downstream 5.0kb downstream 5516 true Scaffold787: 27513-33028 Capsella grandiflora
Cagra.0787s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold787: 27513-32512 Capsella grandiflora
Cagra.0787s0004 10.0kb upstream 10.0kb upstream 10516 true Scaffold787: 32513-43028 Capsella grandiflora
Cagra.0787s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold787: 33029-43028 Capsella grandiflora
Cagra.0787s0004 10.0kb downstream 10.0kb downstream 10516 true Scaffold787: 22513-33028 Capsella grandiflora
Cagra.0787s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold787: 22513-32512 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381433 5261 Brassicaceae View MSA
123840815 5264 Brassicales-Malvales View MSA
124348494 5266 SBM View MSA
124244828 5268 Malvidae View MSA
124063867 5270 Rosid View MSA
123749739 5271 Pentapetalae View MSA
122794818 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain