Gene : Cagra.0796s0012 C. grandiflora v1.1
Defline:  (1 of 64) PTHR32410:SF152 - C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  12
Name:  ? Cagra.0796s0012 Secondary Identifier:  ? PAC:28902470
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0796s0012 0.5kb upstream 0.5kb upstream 2183 true Scaffold796: 28833-31015 Capsella grandiflora
Cagra.0796s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold796: 30516-31015 Capsella grandiflora
Cagra.0796s0012 0.5kb downstream 0.5kb downstream 2183 true Scaffold796: 28333-30515 Capsella grandiflora
Cagra.0796s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold796: 28333-28832 Capsella grandiflora
Cagra.0796s0012 1.0kb upstream 1.0kb upstream 2683 true Scaffold796: 28833-31515 Capsella grandiflora
Cagra.0796s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold796: 30516-31515 Capsella grandiflora
Cagra.0796s0012 1.0kb downstream 1.0kb downstream 2683 true Scaffold796: 27833-30515 Capsella grandiflora
Cagra.0796s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold796: 27833-28832 Capsella grandiflora
Cagra.0796s0012 2.0kb upstream 2.0kb upstream 3683 true Scaffold796: 28833-32515 Capsella grandiflora
Cagra.0796s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold796: 30516-32515 Capsella grandiflora
Cagra.0796s0012 2.0kb downstream 2.0kb downstream 3683 true Scaffold796: 26833-30515 Capsella grandiflora
Cagra.0796s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold796: 26833-28832 Capsella grandiflora
Cagra.0796s0012 5.0kb upstream 5.0kb upstream 6683 true Scaffold796: 28833-35515 Capsella grandiflora
Cagra.0796s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold796: 30516-35515 Capsella grandiflora
Cagra.0796s0012 5.0kb downstream 5.0kb downstream 6683 true Scaffold796: 23833-30515 Capsella grandiflora
Cagra.0796s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold796: 23833-28832 Capsella grandiflora
Cagra.0796s0012 10.0kb upstream 10.0kb upstream 11683 true Scaffold796: 28833-40515 Capsella grandiflora
Cagra.0796s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold796: 30516-40515 Capsella grandiflora
Cagra.0796s0012 10.0kb downstream 10.0kb downstream 11683 true Scaffold796: 18833-30515 Capsella grandiflora
Cagra.0796s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold796: 18833-28832 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378822 5261 Brassicaceae View MSA
123802004 5264 Brassicales-Malvales View MSA
124299235 5266 SBM View MSA
124254358 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain