Gene : Cagra.5441s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33512:SF2 - F16P17.15 Genomic Order:  1
Name:  ? Cagra.5441s0001 Secondary Identifier:  ? PAC:28909116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5441s0001 0.5kb upstream 0.5kb upstream 1496 true Scaffold5441: 768-2263 Capsella grandiflora
Cagra.5441s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5441: 1764-2263 Capsella grandiflora
Cagra.5441s0001 0.5kb downstream 0.5kb downstream 1496 true Scaffold5441: 268-1763 Capsella grandiflora
Cagra.5441s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5441: 268-767 Capsella grandiflora
Cagra.5441s0001 1.0kb upstream 1.0kb upstream 1996 true Scaffold5441: 768-2763 Capsella grandiflora
Cagra.5441s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5441: 1764-2763 Capsella grandiflora
Cagra.5441s0001 1.0kb downstream 1.0kb downstream 1763 true Scaffold5441: 1-1763 Capsella grandiflora
Cagra.5441s0001 1.0kb downstream 1.0kb downstream 767 false Scaffold5441: 1-767 Capsella grandiflora
Cagra.5441s0001 2.0kb upstream 2.0kb upstream 2996 true Scaffold5441: 768-3763 Capsella grandiflora
Cagra.5441s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5441: 1764-3763 Capsella grandiflora
Cagra.5441s0001 2.0kb downstream 2.0kb downstream 1763 true Scaffold5441: 1-1763 Capsella grandiflora
Cagra.5441s0001 2.0kb downstream 2.0kb downstream 767 false Scaffold5441: 1-767 Capsella grandiflora
Cagra.5441s0001 5.0kb upstream 5.0kb upstream 5996 true Scaffold5441: 768-6763 Capsella grandiflora
Cagra.5441s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold5441: 1764-6763 Capsella grandiflora
Cagra.5441s0001 5.0kb downstream 5.0kb downstream 1763 true Scaffold5441: 1-1763 Capsella grandiflora
Cagra.5441s0001 5.0kb downstream 5.0kb downstream 767 false Scaffold5441: 1-767 Capsella grandiflora
Cagra.5441s0001 10.0kb upstream 10.0kb upstream 9007 true Scaffold5441: 768-9774 Capsella grandiflora
Cagra.5441s0001 10.0kb upstream 10.0kb upstream 8011 false Scaffold5441: 1764-9774 Capsella grandiflora
Cagra.5441s0001 10.0kb downstream 10.0kb downstream 1763 true Scaffold5441: 1-1763 Capsella grandiflora
Cagra.5441s0001 10.0kb downstream 10.0kb downstream 767 false Scaffold5441: 1-767 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366756 5261 Brassicaceae View MSA
123837259 5264 Brassicales-Malvales View MSA
124347177 5266 SBM View MSA
124244151 5268 Malvidae View MSA
124063099 5270 Rosid View MSA
123739711 5271 Pentapetalae View MSA
122787000 5272 Eudicot View MSA
122049510 5273 Angiosperm View MSA
121311447 5274 Embryophyte View MSA
123348742 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain