Gene : Cagra.0799s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22952:SF162 - BZIP TRANSCRIPTION FACTOR ATB2 Genomic Order:  11
Name:  ? Cagra.0799s0011 Secondary Identifier:  ? PAC:28899073
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0799s0011 0.5kb upstream 0.5kb upstream 1695 true Scaffold799: 41384-43078 Capsella grandiflora
Cagra.0799s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold799: 41384-41883 Capsella grandiflora
Cagra.0799s0011 0.5kb downstream 0.5kb downstream 1695 true Scaffold799: 41884-43578 Capsella grandiflora
Cagra.0799s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold799: 43079-43578 Capsella grandiflora
Cagra.0799s0011 1.0kb upstream 1.0kb upstream 2195 true Scaffold799: 40884-43078 Capsella grandiflora
Cagra.0799s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold799: 40884-41883 Capsella grandiflora
Cagra.0799s0011 1.0kb downstream 1.0kb downstream 2195 true Scaffold799: 41884-44078 Capsella grandiflora
Cagra.0799s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold799: 43079-44078 Capsella grandiflora
Cagra.0799s0011 2.0kb upstream 2.0kb upstream 3195 true Scaffold799: 39884-43078 Capsella grandiflora
Cagra.0799s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold799: 39884-41883 Capsella grandiflora
Cagra.0799s0011 2.0kb downstream 2.0kb downstream 3195 true Scaffold799: 41884-45078 Capsella grandiflora
Cagra.0799s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold799: 43079-45078 Capsella grandiflora
Cagra.0799s0011 5.0kb upstream 5.0kb upstream 6195 true Scaffold799: 36884-43078 Capsella grandiflora
Cagra.0799s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold799: 36884-41883 Capsella grandiflora
Cagra.0799s0011 5.0kb downstream 5.0kb downstream 6195 true Scaffold799: 41884-48078 Capsella grandiflora
Cagra.0799s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold799: 43079-48078 Capsella grandiflora
Cagra.0799s0011 10.0kb upstream 10.0kb upstream 11195 true Scaffold799: 31884-43078 Capsella grandiflora
Cagra.0799s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold799: 31884-41883 Capsella grandiflora
Cagra.0799s0011 10.0kb downstream 10.0kb downstream 11195 true Scaffold799: 41884-53078 Capsella grandiflora
Cagra.0799s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold799: 43079-53078 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367736 5261 Brassicaceae View MSA
123839150 5264 Brassicales-Malvales View MSA
124350098 5266 SBM View MSA
124247996 5268 Malvidae View MSA
124069594 5270 Rosid View MSA
123751386 5271 Pentapetalae View MSA
122786761 5272 Eudicot View MSA
122045115 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain