Gene : Cagra.5414s0047 C. grandiflora v1.1
Defline:  (1 of 1) PTHR18937//PTHR18937:SF222 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER Genomic Order:  47
Name:  ? Cagra.5414s0047 Secondary Identifier:  ? PAC:28913675
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5414s0047 0.5kb upstream 0.5kb upstream 3653 true Scaffold5414: 134452-138104 Capsella grandiflora
Cagra.5414s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold5414: 137605-138104 Capsella grandiflora
Cagra.5414s0047 0.5kb downstream 0.5kb downstream 3653 true Scaffold5414: 133952-137604 Capsella grandiflora
Cagra.5414s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold5414: 133952-134451 Capsella grandiflora
Cagra.5414s0047 1.0kb upstream 1.0kb upstream 4153 true Scaffold5414: 134452-138604 Capsella grandiflora
Cagra.5414s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold5414: 137605-138604 Capsella grandiflora
Cagra.5414s0047 1.0kb downstream 1.0kb downstream 4153 true Scaffold5414: 133452-137604 Capsella grandiflora
Cagra.5414s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold5414: 133452-134451 Capsella grandiflora
Cagra.5414s0047 2.0kb upstream 2.0kb upstream 5153 true Scaffold5414: 134452-139604 Capsella grandiflora
Cagra.5414s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold5414: 137605-139604 Capsella grandiflora
Cagra.5414s0047 2.0kb downstream 2.0kb downstream 5153 true Scaffold5414: 132452-137604 Capsella grandiflora
Cagra.5414s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold5414: 132452-134451 Capsella grandiflora
Cagra.5414s0047 5.0kb upstream 5.0kb upstream 8153 true Scaffold5414: 134452-142604 Capsella grandiflora
Cagra.5414s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold5414: 137605-142604 Capsella grandiflora
Cagra.5414s0047 5.0kb downstream 5.0kb downstream 8153 true Scaffold5414: 129452-137604 Capsella grandiflora
Cagra.5414s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold5414: 129452-134451 Capsella grandiflora
Cagra.5414s0047 10.0kb upstream 10.0kb upstream 13153 true Scaffold5414: 134452-147604 Capsella grandiflora
Cagra.5414s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold5414: 137605-147604 Capsella grandiflora
Cagra.5414s0047 10.0kb downstream 10.0kb downstream 13153 true Scaffold5414: 124452-137604 Capsella grandiflora
Cagra.5414s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold5414: 124452-134451 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041045 5273 Angiosperm View MSA
122368880 5261 Brassicaceae View MSA
123829289 5264 Brassicales-Malvales View MSA
124341898 5266 SBM View MSA
124254187 5268 Malvidae View MSA
124073279 5270 Rosid View MSA
123750946 5271 Pentapetalae View MSA
122787663 5272 Eudicot View MSA
121351089 5274 Embryophyte View MSA
123382004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain