Gene : Cagra.5679s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31852:SF0 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  1
Name:  ? Cagra.5679s0001 Secondary Identifier:  ? PAC:28896621
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5679s0001 0.5kb upstream 0.5kb upstream 1563 true Scaffold5679: 3708-5270 Capsella grandiflora
Cagra.5679s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5679: 3708-4207 Capsella grandiflora
Cagra.5679s0001 0.5kb downstream 0.5kb downstream 1563 true Scaffold5679: 4208-5770 Capsella grandiflora
Cagra.5679s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5679: 5271-5770 Capsella grandiflora
Cagra.5679s0001 1.0kb upstream 1.0kb upstream 2063 true Scaffold5679: 3208-5270 Capsella grandiflora
Cagra.5679s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5679: 3208-4207 Capsella grandiflora
Cagra.5679s0001 1.0kb downstream 1.0kb downstream 2063 true Scaffold5679: 4208-6270 Capsella grandiflora
Cagra.5679s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5679: 5271-6270 Capsella grandiflora
Cagra.5679s0001 2.0kb upstream 2.0kb upstream 3063 true Scaffold5679: 2208-5270 Capsella grandiflora
Cagra.5679s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5679: 2208-4207 Capsella grandiflora
Cagra.5679s0001 2.0kb downstream 2.0kb downstream 3063 true Scaffold5679: 4208-7270 Capsella grandiflora
Cagra.5679s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5679: 5271-7270 Capsella grandiflora
Cagra.5679s0001 5.0kb upstream 5.0kb upstream 5270 true Scaffold5679: 1-5270 Capsella grandiflora
Cagra.5679s0001 5.0kb upstream 5.0kb upstream 4207 false Scaffold5679: 1-4207 Capsella grandiflora
Cagra.5679s0001 5.0kb downstream 5.0kb downstream 6063 true Scaffold5679: 4208-10270 Capsella grandiflora
Cagra.5679s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5679: 5271-10270 Capsella grandiflora
Cagra.5679s0001 10.0kb upstream 10.0kb upstream 5270 true Scaffold5679: 1-5270 Capsella grandiflora
Cagra.5679s0001 10.0kb upstream 10.0kb upstream 4207 false Scaffold5679: 1-4207 Capsella grandiflora
Cagra.5679s0001 10.0kb downstream 10.0kb downstream 11063 true Scaffold5679: 4208-15270 Capsella grandiflora
Cagra.5679s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5679: 5271-15270 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365014 5261 Brassicaceae View MSA
123835928 5264 Brassicales-Malvales View MSA
124343458 5266 SBM View MSA
124240139 5268 Malvidae View MSA
124061418 5270 Rosid View MSA
123742078 5271 Pentapetalae View MSA
122788444 5272 Eudicot View MSA
122042676 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain