Gene : Cagra.0821s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31100:SF15 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 24-RELATED Genomic Order:  5
Name:  ? Cagra.0821s0005 Secondary Identifier:  ? PAC:28917772
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0821s0005 0.5kb upstream 0.5kb upstream 1484 true Scaffold821: 12382-13865 Capsella grandiflora
Cagra.0821s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold821: 13366-13865 Capsella grandiflora
Cagra.0821s0005 0.5kb downstream 0.5kb downstream 1484 true Scaffold821: 11882-13365 Capsella grandiflora
Cagra.0821s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold821: 11882-12381 Capsella grandiflora
Cagra.0821s0005 1.0kb upstream 1.0kb upstream 1984 true Scaffold821: 12382-14365 Capsella grandiflora
Cagra.0821s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold821: 13366-14365 Capsella grandiflora
Cagra.0821s0005 1.0kb downstream 1.0kb downstream 1984 true Scaffold821: 11382-13365 Capsella grandiflora
Cagra.0821s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold821: 11382-12381 Capsella grandiflora
Cagra.0821s0005 2.0kb upstream 2.0kb upstream 2984 true Scaffold821: 12382-15365 Capsella grandiflora
Cagra.0821s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold821: 13366-15365 Capsella grandiflora
Cagra.0821s0005 2.0kb downstream 2.0kb downstream 2984 true Scaffold821: 10382-13365 Capsella grandiflora
Cagra.0821s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold821: 10382-12381 Capsella grandiflora
Cagra.0821s0005 5.0kb upstream 5.0kb upstream 5956 true Scaffold821: 12382-18337 Capsella grandiflora
Cagra.0821s0005 5.0kb upstream 5.0kb upstream 4972 false Scaffold821: 13366-18337 Capsella grandiflora
Cagra.0821s0005 5.0kb downstream 5.0kb downstream 5984 true Scaffold821: 7382-13365 Capsella grandiflora
Cagra.0821s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold821: 7382-12381 Capsella grandiflora
Cagra.0821s0005 10.0kb upstream 10.0kb upstream 5956 true Scaffold821: 12382-18337 Capsella grandiflora
Cagra.0821s0005 10.0kb upstream 10.0kb upstream 4972 false Scaffold821: 13366-18337 Capsella grandiflora
Cagra.0821s0005 10.0kb downstream 10.0kb downstream 10984 true Scaffold821: 2382-13365 Capsella grandiflora
Cagra.0821s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold821: 2382-12381 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368458 5261 Brassicaceae View MSA
123837037 5264 Brassicales-Malvales View MSA
124344356 5266 SBM View MSA
124246711 5268 Malvidae View MSA
124066215 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain