Gene : Cagra.0824s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24064:SF242 - ORGANIC CATION/CARNITINE TRANSPORTER 3 Genomic Order:  11
Name:  ? Cagra.0824s0011 Secondary Identifier:  ? PAC:28900033
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0011 0.5kb upstream 0.5kb upstream 2039 true Scaffold824: 33685-35723 Capsella grandiflora
Cagra.0824s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 33685-34184 Capsella grandiflora
Cagra.0824s0011 0.5kb downstream 0.5kb downstream 2039 true Scaffold824: 34185-36223 Capsella grandiflora
Cagra.0824s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 35724-36223 Capsella grandiflora
Cagra.0824s0011 1.0kb upstream 1.0kb upstream 2539 true Scaffold824: 33185-35723 Capsella grandiflora
Cagra.0824s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 33185-34184 Capsella grandiflora
Cagra.0824s0011 1.0kb downstream 1.0kb downstream 2539 true Scaffold824: 34185-36723 Capsella grandiflora
Cagra.0824s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 35724-36723 Capsella grandiflora
Cagra.0824s0011 2.0kb upstream 2.0kb upstream 3539 true Scaffold824: 32185-35723 Capsella grandiflora
Cagra.0824s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 32185-34184 Capsella grandiflora
Cagra.0824s0011 2.0kb downstream 2.0kb downstream 3539 true Scaffold824: 34185-37723 Capsella grandiflora
Cagra.0824s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 35724-37723 Capsella grandiflora
Cagra.0824s0011 5.0kb upstream 5.0kb upstream 6539 true Scaffold824: 29185-35723 Capsella grandiflora
Cagra.0824s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 29185-34184 Capsella grandiflora
Cagra.0824s0011 5.0kb downstream 5.0kb downstream 6539 true Scaffold824: 34185-40723 Capsella grandiflora
Cagra.0824s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 35724-40723 Capsella grandiflora
Cagra.0824s0011 10.0kb upstream 10.0kb upstream 11539 true Scaffold824: 24185-35723 Capsella grandiflora
Cagra.0824s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 24185-34184 Capsella grandiflora
Cagra.0824s0011 10.0kb downstream 10.0kb downstream 11539 true Scaffold824: 34185-45723 Capsella grandiflora
Cagra.0824s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 35724-45723 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363539 5261 Brassicaceae View MSA
123833195 5264 Brassicales-Malvales View MSA
124338748 5266 SBM View MSA
124251274 5268 Malvidae View MSA
124063711 5270 Rosid View MSA
123752944 5271 Pentapetalae View MSA
122793409 5272 Eudicot View MSA
122049028 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121351070 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain