Gene : Cagra.0824s0053 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  53
Name:  ? Cagra.0824s0053 Secondary Identifier:  ? PAC:28900071
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0053 0.5kb upstream 0.5kb upstream 2499 true Scaffold824: 185241-187739 Capsella grandiflora
Cagra.0824s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 185241-185740 Capsella grandiflora
Cagra.0824s0053 0.5kb downstream 0.5kb downstream 2499 true Scaffold824: 185741-188239 Capsella grandiflora
Cagra.0824s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 187740-188239 Capsella grandiflora
Cagra.0824s0053 1.0kb upstream 1.0kb upstream 2999 true Scaffold824: 184741-187739 Capsella grandiflora
Cagra.0824s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 184741-185740 Capsella grandiflora
Cagra.0824s0053 1.0kb downstream 1.0kb downstream 2999 true Scaffold824: 185741-188739 Capsella grandiflora
Cagra.0824s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 187740-188739 Capsella grandiflora
Cagra.0824s0053 2.0kb upstream 2.0kb upstream 3999 true Scaffold824: 183741-187739 Capsella grandiflora
Cagra.0824s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 183741-185740 Capsella grandiflora
Cagra.0824s0053 2.0kb downstream 2.0kb downstream 3999 true Scaffold824: 185741-189739 Capsella grandiflora
Cagra.0824s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 187740-189739 Capsella grandiflora
Cagra.0824s0053 5.0kb upstream 5.0kb upstream 6999 true Scaffold824: 180741-187739 Capsella grandiflora
Cagra.0824s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 180741-185740 Capsella grandiflora
Cagra.0824s0053 5.0kb downstream 5.0kb downstream 6999 true Scaffold824: 185741-192739 Capsella grandiflora
Cagra.0824s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 187740-192739 Capsella grandiflora
Cagra.0824s0053 10.0kb upstream 10.0kb upstream 11999 true Scaffold824: 175741-187739 Capsella grandiflora
Cagra.0824s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 175741-185740 Capsella grandiflora
Cagra.0824s0053 10.0kb downstream 10.0kb downstream 11999 true Scaffold824: 185741-197739 Capsella grandiflora
Cagra.0824s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 187740-197739 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041217 5273 Angiosperm View MSA
122361633 5261 Brassicaceae View MSA
123830531 5264 Brassicales-Malvales View MSA
124347816 5266 SBM View MSA
124243814 5268 Malvidae View MSA
124067032 5270 Rosid View MSA
123740390 5271 Pentapetalae View MSA
122769977 5272 Eudicot View MSA
121309817 5274 Embryophyte View MSA
123347469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain