Gene : Cagra.5641s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23306:SF3 - TUMOR SUPPRESSOR PROTEIN 101 Genomic Order:  6
Name:  ? Cagra.5641s0006 Secondary Identifier:  ? PAC:28908409
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5641s0006 0.5kb upstream 0.5kb upstream 1697 true Scaffold5641: 13868-15564 Capsella grandiflora
Cagra.5641s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold5641: 15065-15564 Capsella grandiflora
Cagra.5641s0006 0.5kb downstream 0.5kb downstream 1697 true Scaffold5641: 13368-15064 Capsella grandiflora
Cagra.5641s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold5641: 13368-13867 Capsella grandiflora
Cagra.5641s0006 1.0kb upstream 1.0kb upstream 2197 true Scaffold5641: 13868-16064 Capsella grandiflora
Cagra.5641s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold5641: 15065-16064 Capsella grandiflora
Cagra.5641s0006 1.0kb downstream 1.0kb downstream 2197 true Scaffold5641: 12868-15064 Capsella grandiflora
Cagra.5641s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold5641: 12868-13867 Capsella grandiflora
Cagra.5641s0006 2.0kb upstream 2.0kb upstream 3197 true Scaffold5641: 13868-17064 Capsella grandiflora
Cagra.5641s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold5641: 15065-17064 Capsella grandiflora
Cagra.5641s0006 2.0kb downstream 2.0kb downstream 3197 true Scaffold5641: 11868-15064 Capsella grandiflora
Cagra.5641s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold5641: 11868-13867 Capsella grandiflora
Cagra.5641s0006 5.0kb upstream 5.0kb upstream 6197 true Scaffold5641: 13868-20064 Capsella grandiflora
Cagra.5641s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold5641: 15065-20064 Capsella grandiflora
Cagra.5641s0006 5.0kb downstream 5.0kb downstream 6197 true Scaffold5641: 8868-15064 Capsella grandiflora
Cagra.5641s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold5641: 8868-13867 Capsella grandiflora
Cagra.5641s0006 10.0kb upstream 10.0kb upstream 11197 true Scaffold5641: 13868-25064 Capsella grandiflora
Cagra.5641s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold5641: 15065-25064 Capsella grandiflora
Cagra.5641s0006 10.0kb downstream 10.0kb downstream 11197 true Scaffold5641: 3868-15064 Capsella grandiflora
Cagra.5641s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold5641: 3868-13867 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367293 5261 Brassicaceae View MSA
123840288 5264 Brassicales-Malvales View MSA
124340061 5266 SBM View MSA
124243180 5268 Malvidae View MSA
124067551 5270 Rosid View MSA
123747284 5271 Pentapetalae View MSA
122786974 5272 Eudicot View MSA
122050424 5273 Angiosperm View MSA
121347695 5274 Embryophyte View MSA
123427966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain