Gene : Cagra.5864s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31852:SF0 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  2
Name:  ? Cagra.5864s0002 Secondary Identifier:  ? PAC:28912367
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5864s0002 0.5kb upstream 0.5kb upstream 1349 true Scaffold5864: 3641-4989 Capsella grandiflora
Cagra.5864s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5864: 4490-4989 Capsella grandiflora
Cagra.5864s0002 0.5kb downstream 0.5kb downstream 1349 true Scaffold5864: 3141-4489 Capsella grandiflora
Cagra.5864s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5864: 3141-3640 Capsella grandiflora
Cagra.5864s0002 1.0kb upstream 1.0kb upstream 1849 true Scaffold5864: 3641-5489 Capsella grandiflora
Cagra.5864s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5864: 4490-5489 Capsella grandiflora
Cagra.5864s0002 1.0kb downstream 1.0kb downstream 1849 true Scaffold5864: 2641-4489 Capsella grandiflora
Cagra.5864s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5864: 2641-3640 Capsella grandiflora
Cagra.5864s0002 2.0kb upstream 2.0kb upstream 2849 true Scaffold5864: 3641-6489 Capsella grandiflora
Cagra.5864s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5864: 4490-6489 Capsella grandiflora
Cagra.5864s0002 2.0kb downstream 2.0kb downstream 2849 true Scaffold5864: 1641-4489 Capsella grandiflora
Cagra.5864s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5864: 1641-3640 Capsella grandiflora
Cagra.5864s0002 5.0kb upstream 5.0kb upstream 5849 true Scaffold5864: 3641-9489 Capsella grandiflora
Cagra.5864s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5864: 4490-9489 Capsella grandiflora
Cagra.5864s0002 5.0kb downstream 5.0kb downstream 4489 true Scaffold5864: 1-4489 Capsella grandiflora
Cagra.5864s0002 5.0kb downstream 5.0kb downstream 3640 false Scaffold5864: 1-3640 Capsella grandiflora
Cagra.5864s0002 10.0kb upstream 10.0kb upstream 10849 true Scaffold5864: 3641-14489 Capsella grandiflora
Cagra.5864s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold5864: 4490-14489 Capsella grandiflora
Cagra.5864s0002 10.0kb downstream 10.0kb downstream 4489 true Scaffold5864: 1-4489 Capsella grandiflora
Cagra.5864s0002 10.0kb downstream 10.0kb downstream 3640 false Scaffold5864: 1-3640 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370124 5261 Brassicaceae View MSA
123799904 5264 Brassicales-Malvales View MSA
124297376 5266 SBM View MSA
124149285 5268 Malvidae View MSA
123875122 5270 Rosid View MSA
123742078 5271 Pentapetalae View MSA
122788444 5272 Eudicot View MSA
122042676 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain