Gene : Cagra.0914s0001 C. grandiflora v1.1
Defline:  (1 of 2) KOG4382 - Uncharacterized conserved protein, contains DTW domain Genomic Order:  1
Name:  ? Cagra.0914s0001 Secondary Identifier:  ? PAC:28910546
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0914s0001 0.5kb upstream 0.5kb upstream 710 true Scaffold914: 1-710 Capsella grandiflora
Cagra.0914s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold914: 1-2 Capsella grandiflora
Cagra.0914s0001 0.5kb downstream 0.5kb downstream 1208 true Scaffold914: 3-1210 Capsella grandiflora
Cagra.0914s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold914: 711-1210 Capsella grandiflora
Cagra.0914s0001 1.0kb upstream 1.0kb upstream 710 true Scaffold914: 1-710 Capsella grandiflora
Cagra.0914s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold914: 1-2 Capsella grandiflora
Cagra.0914s0001 1.0kb downstream 1.0kb downstream 1708 true Scaffold914: 3-1710 Capsella grandiflora
Cagra.0914s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold914: 711-1710 Capsella grandiflora
Cagra.0914s0001 2.0kb upstream 2.0kb upstream 710 true Scaffold914: 1-710 Capsella grandiflora
Cagra.0914s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold914: 1-2 Capsella grandiflora
Cagra.0914s0001 2.0kb downstream 2.0kb downstream 2708 true Scaffold914: 3-2710 Capsella grandiflora
Cagra.0914s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold914: 711-2710 Capsella grandiflora
Cagra.0914s0001 5.0kb upstream 5.0kb upstream 710 true Scaffold914: 1-710 Capsella grandiflora
Cagra.0914s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold914: 1-2 Capsella grandiflora
Cagra.0914s0001 5.0kb downstream 5.0kb downstream 5708 true Scaffold914: 3-5710 Capsella grandiflora
Cagra.0914s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold914: 711-5710 Capsella grandiflora
Cagra.0914s0001 10.0kb upstream 10.0kb upstream 710 true Scaffold914: 1-710 Capsella grandiflora
Cagra.0914s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold914: 1-2 Capsella grandiflora
Cagra.0914s0001 10.0kb downstream 10.0kb downstream 10708 true Scaffold914: 3-10710 Capsella grandiflora
Cagra.0914s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold914: 711-10710 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334479 5261 Brassicaceae Singleton cluster - no MSA
123837957 5264 Brassicales-Malvales View MSA
124337573 5266 SBM View MSA
124243049 5268 Malvidae View MSA
124063281 5270 Rosid View MSA
123739624 5271 Pentapetalae View MSA
122792968 5272 Eudicot View MSA
122048887 5273 Angiosperm View MSA
121344319 5274 Embryophyte View MSA
123424782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain