Gene : Cagra.0917s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32379:SF1 - GUANIDINOACETATE N-METHYLTRANSFERASE Genomic Order:  1
Name:  ? Cagra.0917s0001 Secondary Identifier:  ? PAC:28909373
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0917s0001 0.5kb upstream 0.5kb upstream 1604 true Scaffold917: 1700-3303 Capsella grandiflora
Cagra.0917s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold917: 1700-2199 Capsella grandiflora
Cagra.0917s0001 0.5kb downstream 0.5kb downstream 1604 true Scaffold917: 2200-3803 Capsella grandiflora
Cagra.0917s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold917: 3304-3803 Capsella grandiflora
Cagra.0917s0001 1.0kb upstream 1.0kb upstream 2104 true Scaffold917: 1200-3303 Capsella grandiflora
Cagra.0917s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold917: 1200-2199 Capsella grandiflora
Cagra.0917s0001 1.0kb downstream 1.0kb downstream 2104 true Scaffold917: 2200-4303 Capsella grandiflora
Cagra.0917s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold917: 3304-4303 Capsella grandiflora
Cagra.0917s0001 2.0kb upstream 2.0kb upstream 3104 true Scaffold917: 200-3303 Capsella grandiflora
Cagra.0917s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold917: 200-2199 Capsella grandiflora
Cagra.0917s0001 2.0kb downstream 2.0kb downstream 3104 true Scaffold917: 2200-5303 Capsella grandiflora
Cagra.0917s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold917: 3304-5303 Capsella grandiflora
Cagra.0917s0001 5.0kb upstream 5.0kb upstream 3303 true Scaffold917: 1-3303 Capsella grandiflora
Cagra.0917s0001 5.0kb upstream 5.0kb upstream 2199 false Scaffold917: 1-2199 Capsella grandiflora
Cagra.0917s0001 5.0kb downstream 5.0kb downstream 6104 true Scaffold917: 2200-8303 Capsella grandiflora
Cagra.0917s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold917: 3304-8303 Capsella grandiflora
Cagra.0917s0001 10.0kb upstream 10.0kb upstream 3303 true Scaffold917: 1-3303 Capsella grandiflora
Cagra.0917s0001 10.0kb upstream 10.0kb upstream 2199 false Scaffold917: 1-2199 Capsella grandiflora
Cagra.0917s0001 10.0kb downstream 10.0kb downstream 11104 true Scaffold917: 2200-13303 Capsella grandiflora
Cagra.0917s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold917: 3304-13303 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377229 5261 Brassicaceae View MSA
123827987 5264 Brassicales-Malvales View MSA
124347072 5266 SBM View MSA
124242944 5268 Malvidae View MSA
124062153 5270 Rosid View MSA
123740979 5271 Pentapetalae View MSA
122791404 5272 Eudicot View MSA
122042528 5273 Angiosperm View MSA
121344522 5274 Embryophyte View MSA
123424974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain