Gene : Cagra.0891s0063 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23315:SF64 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  63
Name:  ? Cagra.0891s0063 Secondary Identifier:  ? PAC:28912870
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7511 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0891s0063 0.5kb upstream 0.5kb upstream 1580 true Scaffold891: 222836-224415 Capsella grandiflora
Cagra.0891s0063 0.5kb upstream 0.5kb upstream 500 false Scaffold891: 223916-224415 Capsella grandiflora
Cagra.0891s0063 0.5kb downstream 0.5kb downstream 1580 true Scaffold891: 222336-223915 Capsella grandiflora
Cagra.0891s0063 0.5kb downstream 0.5kb downstream 500 false Scaffold891: 222336-222835 Capsella grandiflora
Cagra.0891s0063 1.0kb upstream 1.0kb upstream 2080 true Scaffold891: 222836-224915 Capsella grandiflora
Cagra.0891s0063 1.0kb upstream 1.0kb upstream 1000 false Scaffold891: 223916-224915 Capsella grandiflora
Cagra.0891s0063 1.0kb downstream 1.0kb downstream 2080 true Scaffold891: 221836-223915 Capsella grandiflora
Cagra.0891s0063 1.0kb downstream 1.0kb downstream 1000 false Scaffold891: 221836-222835 Capsella grandiflora
Cagra.0891s0063 2.0kb upstream 2.0kb upstream 3080 true Scaffold891: 222836-225915 Capsella grandiflora
Cagra.0891s0063 2.0kb upstream 2.0kb upstream 2000 false Scaffold891: 223916-225915 Capsella grandiflora
Cagra.0891s0063 2.0kb downstream 2.0kb downstream 3080 true Scaffold891: 220836-223915 Capsella grandiflora
Cagra.0891s0063 2.0kb downstream 2.0kb downstream 2000 false Scaffold891: 220836-222835 Capsella grandiflora
Cagra.0891s0063 5.0kb upstream 5.0kb upstream 6080 true Scaffold891: 222836-228915 Capsella grandiflora
Cagra.0891s0063 5.0kb upstream 5.0kb upstream 5000 false Scaffold891: 223916-228915 Capsella grandiflora
Cagra.0891s0063 5.0kb downstream 5.0kb downstream 6080 true Scaffold891: 217836-223915 Capsella grandiflora
Cagra.0891s0063 5.0kb downstream 5.0kb downstream 5000 false Scaffold891: 217836-222835 Capsella grandiflora
Cagra.0891s0063 10.0kb upstream 10.0kb upstream 11080 true Scaffold891: 222836-233915 Capsella grandiflora
Cagra.0891s0063 10.0kb upstream 10.0kb upstream 10000 false Scaffold891: 223916-233915 Capsella grandiflora
Cagra.0891s0063 10.0kb downstream 10.0kb downstream 11080 true Scaffold891: 212836-223915 Capsella grandiflora
Cagra.0891s0063 10.0kb downstream 10.0kb downstream 10000 false Scaffold891: 212836-222835 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343407 5261 Brassicaceae View MSA
123783620 5264 Brassicales-Malvales View MSA
124281841 5266 SBM View MSA
124136525 5268 Malvidae View MSA
123864371 5270 Rosid View MSA
123449688 5271 Pentapetalae View MSA
122485218 5272 Eudicot View MSA
122047574 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain