Gene : Cagra.0964s0001 C. grandiflora v1.1
Defline:  (1 of 137) PTHR31790:SF10 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.0964s0001 Secondary Identifier:  ? PAC:28911695
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0964s0001 0.5kb upstream 0.5kb upstream 1376 true Scaffold964: 5-1380 Capsella grandiflora
Cagra.0964s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold964: 881-1380 Capsella grandiflora
Cagra.0964s0001 0.5kb downstream 0.5kb downstream 880 true Scaffold964: 1-880 Capsella grandiflora
Cagra.0964s0001 0.5kb downstream 0.5kb downstream 4 false Scaffold964: 1-4 Capsella grandiflora
Cagra.0964s0001 1.0kb upstream 1.0kb upstream 1876 true Scaffold964: 5-1880 Capsella grandiflora
Cagra.0964s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold964: 881-1880 Capsella grandiflora
Cagra.0964s0001 1.0kb downstream 1.0kb downstream 880 true Scaffold964: 1-880 Capsella grandiflora
Cagra.0964s0001 1.0kb downstream 1.0kb downstream 4 false Scaffold964: 1-4 Capsella grandiflora
Cagra.0964s0001 2.0kb upstream 2.0kb upstream 2876 true Scaffold964: 5-2880 Capsella grandiflora
Cagra.0964s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold964: 881-2880 Capsella grandiflora
Cagra.0964s0001 2.0kb downstream 2.0kb downstream 880 true Scaffold964: 1-880 Capsella grandiflora
Cagra.0964s0001 2.0kb downstream 2.0kb downstream 4 false Scaffold964: 1-4 Capsella grandiflora
Cagra.0964s0001 5.0kb upstream 5.0kb upstream 5876 true Scaffold964: 5-5880 Capsella grandiflora
Cagra.0964s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold964: 881-5880 Capsella grandiflora
Cagra.0964s0001 5.0kb downstream 5.0kb downstream 880 true Scaffold964: 1-880 Capsella grandiflora
Cagra.0964s0001 5.0kb downstream 5.0kb downstream 4 false Scaffold964: 1-4 Capsella grandiflora
Cagra.0964s0001 10.0kb upstream 10.0kb upstream 10876 true Scaffold964: 5-10880 Capsella grandiflora
Cagra.0964s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold964: 881-10880 Capsella grandiflora
Cagra.0964s0001 10.0kb downstream 10.0kb downstream 880 true Scaffold964: 1-880 Capsella grandiflora
Cagra.0964s0001 10.0kb downstream 10.0kb downstream 4 false Scaffold964: 1-4 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121503090 5273 Angiosperm View MSA
122344280 5261 Brassicaceae View MSA
123784306 5264 Brassicales-Malvales View MSA
124282495 5266 SBM View MSA
124137088 5268 Malvidae View MSA
123864855 5270 Rosid View MSA
123450125 5271 Pentapetalae View MSA
122485652 5272 Eudicot View MSA
120776385 5274 Embryophyte View MSA
122818660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain