Gene : Cagra.0917s0053 C. grandiflora v1.1
Defline:  (1 of 8) PF05340 - Protein of unknown function (DUF740) Genomic Order:  53
Name:  ? Cagra.0917s0053 Secondary Identifier:  ? PAC:28909335
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0917s0053 0.5kb upstream 0.5kb upstream 1185 true Scaffold917: 247230-248414 Capsella grandiflora
Cagra.0917s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold917: 247230-247729 Capsella grandiflora
Cagra.0917s0053 0.5kb downstream 0.5kb downstream 1185 true Scaffold917: 247730-248914 Capsella grandiflora
Cagra.0917s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold917: 248415-248914 Capsella grandiflora
Cagra.0917s0053 1.0kb upstream 1.0kb upstream 1685 true Scaffold917: 246730-248414 Capsella grandiflora
Cagra.0917s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold917: 246730-247729 Capsella grandiflora
Cagra.0917s0053 1.0kb downstream 1.0kb downstream 1685 true Scaffold917: 247730-249414 Capsella grandiflora
Cagra.0917s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold917: 248415-249414 Capsella grandiflora
Cagra.0917s0053 2.0kb upstream 2.0kb upstream 2685 true Scaffold917: 245730-248414 Capsella grandiflora
Cagra.0917s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold917: 245730-247729 Capsella grandiflora
Cagra.0917s0053 2.0kb downstream 2.0kb downstream 2685 true Scaffold917: 247730-250414 Capsella grandiflora
Cagra.0917s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold917: 248415-250414 Capsella grandiflora
Cagra.0917s0053 5.0kb upstream 5.0kb upstream 5685 true Scaffold917: 242730-248414 Capsella grandiflora
Cagra.0917s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold917: 242730-247729 Capsella grandiflora
Cagra.0917s0053 5.0kb downstream 5.0kb downstream 5685 true Scaffold917: 247730-253414 Capsella grandiflora
Cagra.0917s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold917: 248415-253414 Capsella grandiflora
Cagra.0917s0053 10.0kb upstream 10.0kb upstream 10685 true Scaffold917: 237730-248414 Capsella grandiflora
Cagra.0917s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold917: 237730-247729 Capsella grandiflora
Cagra.0917s0053 10.0kb downstream 10.0kb downstream 10685 true Scaffold917: 247730-258414 Capsella grandiflora
Cagra.0917s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold917: 248415-258414 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364273 5261 Brassicaceae View MSA
123829426 5264 Brassicales-Malvales View MSA
124351646 5266 SBM View MSA
124253514 5268 Malvidae View MSA
124071239 5270 Rosid View MSA
123750845 5271 Pentapetalae View MSA
122791847 5272 Eudicot View MSA
122049907 5273 Angiosperm View MSA
121311645 5274 Embryophyte View MSA
123348915 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain