Gene : Cagra.5961s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31307:SF17 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K7P8 Genomic Order:  1
Name:  ? Cagra.5961s0001 Secondary Identifier:  ? PAC:28894309
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5961s0001 0.5kb upstream 0.5kb upstream 1433 true Scaffold5961: 4895-6327 Capsella grandiflora
Cagra.5961s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5961: 5828-6327 Capsella grandiflora
Cagra.5961s0001 0.5kb downstream 0.5kb downstream 1433 true Scaffold5961: 4395-5827 Capsella grandiflora
Cagra.5961s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5961: 4395-4894 Capsella grandiflora
Cagra.5961s0001 1.0kb upstream 1.0kb upstream 1933 true Scaffold5961: 4895-6827 Capsella grandiflora
Cagra.5961s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5961: 5828-6827 Capsella grandiflora
Cagra.5961s0001 1.0kb downstream 1.0kb downstream 1933 true Scaffold5961: 3895-5827 Capsella grandiflora
Cagra.5961s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5961: 3895-4894 Capsella grandiflora
Cagra.5961s0001 2.0kb upstream 2.0kb upstream 2933 true Scaffold5961: 4895-7827 Capsella grandiflora
Cagra.5961s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5961: 5828-7827 Capsella grandiflora
Cagra.5961s0001 2.0kb downstream 2.0kb downstream 2933 true Scaffold5961: 2895-5827 Capsella grandiflora
Cagra.5961s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5961: 2895-4894 Capsella grandiflora
Cagra.5961s0001 5.0kb upstream 5.0kb upstream 5933 true Scaffold5961: 4895-10827 Capsella grandiflora
Cagra.5961s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold5961: 5828-10827 Capsella grandiflora
Cagra.5961s0001 5.0kb downstream 5.0kb downstream 5827 true Scaffold5961: 1-5827 Capsella grandiflora
Cagra.5961s0001 5.0kb downstream 5.0kb downstream 4894 false Scaffold5961: 1-4894 Capsella grandiflora
Cagra.5961s0001 10.0kb upstream 10.0kb upstream 10933 true Scaffold5961: 4895-15827 Capsella grandiflora
Cagra.5961s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold5961: 5828-15827 Capsella grandiflora
Cagra.5961s0001 10.0kb downstream 10.0kb downstream 5827 true Scaffold5961: 1-5827 Capsella grandiflora
Cagra.5961s0001 10.0kb downstream 10.0kb downstream 4894 false Scaffold5961: 1-4894 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363869 5261 Brassicaceae View MSA
123835326 5264 Brassicales-Malvales View MSA
124322028 5266 SBM View MSA
124240093 5268 Malvidae View MSA
124068067 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain