Gene : Cagra.6011s0017 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31374:SF56 - AUXIN-REGULATED PROTEIN-RELATED Genomic Order:  17
Name:  ? Cagra.6011s0017 Secondary Identifier:  ? PAC:28895850
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6011s0017 0.5kb upstream 0.5kb upstream 1444 true Scaffold6011: 68436-69879 Capsella grandiflora
Cagra.6011s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold6011: 68436-68935 Capsella grandiflora
Cagra.6011s0017 0.5kb downstream 0.5kb downstream 1444 true Scaffold6011: 68936-70379 Capsella grandiflora
Cagra.6011s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold6011: 69880-70379 Capsella grandiflora
Cagra.6011s0017 1.0kb upstream 1.0kb upstream 1944 true Scaffold6011: 67936-69879 Capsella grandiflora
Cagra.6011s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold6011: 67936-68935 Capsella grandiflora
Cagra.6011s0017 1.0kb downstream 1.0kb downstream 1944 true Scaffold6011: 68936-70879 Capsella grandiflora
Cagra.6011s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold6011: 69880-70879 Capsella grandiflora
Cagra.6011s0017 2.0kb upstream 2.0kb upstream 2944 true Scaffold6011: 66936-69879 Capsella grandiflora
Cagra.6011s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold6011: 66936-68935 Capsella grandiflora
Cagra.6011s0017 2.0kb downstream 2.0kb downstream 2944 true Scaffold6011: 68936-71879 Capsella grandiflora
Cagra.6011s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold6011: 69880-71879 Capsella grandiflora
Cagra.6011s0017 5.0kb upstream 5.0kb upstream 5944 true Scaffold6011: 63936-69879 Capsella grandiflora
Cagra.6011s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold6011: 63936-68935 Capsella grandiflora
Cagra.6011s0017 5.0kb downstream 5.0kb downstream 5944 true Scaffold6011: 68936-74879 Capsella grandiflora
Cagra.6011s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold6011: 69880-74879 Capsella grandiflora
Cagra.6011s0017 10.0kb upstream 10.0kb upstream 10944 true Scaffold6011: 58936-69879 Capsella grandiflora
Cagra.6011s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold6011: 58936-68935 Capsella grandiflora
Cagra.6011s0017 10.0kb downstream 10.0kb downstream 10944 true Scaffold6011: 68936-79879 Capsella grandiflora
Cagra.6011s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold6011: 69880-79879 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373544 5261 Brassicaceae View MSA
123839865 5264 Brassicales-Malvales View MSA
124344146 5266 SBM View MSA
124254272 5268 Malvidae View MSA
124066518 5270 Rosid View MSA
123741344 5271 Pentapetalae View MSA
122791593 5272 Eudicot View MSA
122049926 5273 Angiosperm View MSA
121311651 5274 Embryophyte View MSA
123348921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain