Gene : Cagra.6049s0004 C. grandiflora v1.1
Defline:  (1 of 21) PF00234 - Protease inhibitor/seed storage/LTP family (Tryp_alpha_amyl) Genomic Order:  4
Name:  ? Cagra.6049s0004 Secondary Identifier:  ? PAC:28913291
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6049s0004 0.5kb upstream 0.5kb upstream 1278 true Scaffold6049: 15937-17214 Capsella grandiflora
Cagra.6049s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold6049: 15937-16436 Capsella grandiflora
Cagra.6049s0004 0.5kb downstream 0.5kb downstream 1278 true Scaffold6049: 16437-17714 Capsella grandiflora
Cagra.6049s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold6049: 17215-17714 Capsella grandiflora
Cagra.6049s0004 1.0kb upstream 1.0kb upstream 1778 true Scaffold6049: 15437-17214 Capsella grandiflora
Cagra.6049s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold6049: 15437-16436 Capsella grandiflora
Cagra.6049s0004 1.0kb downstream 1.0kb downstream 1778 true Scaffold6049: 16437-18214 Capsella grandiflora
Cagra.6049s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold6049: 17215-18214 Capsella grandiflora
Cagra.6049s0004 2.0kb upstream 2.0kb upstream 2778 true Scaffold6049: 14437-17214 Capsella grandiflora
Cagra.6049s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold6049: 14437-16436 Capsella grandiflora
Cagra.6049s0004 2.0kb downstream 2.0kb downstream 2778 true Scaffold6049: 16437-19214 Capsella grandiflora
Cagra.6049s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold6049: 17215-19214 Capsella grandiflora
Cagra.6049s0004 5.0kb upstream 5.0kb upstream 5778 true Scaffold6049: 11437-17214 Capsella grandiflora
Cagra.6049s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold6049: 11437-16436 Capsella grandiflora
Cagra.6049s0004 5.0kb downstream 5.0kb downstream 5778 true Scaffold6049: 16437-22214 Capsella grandiflora
Cagra.6049s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold6049: 17215-22214 Capsella grandiflora
Cagra.6049s0004 10.0kb upstream 10.0kb upstream 10778 true Scaffold6049: 6437-17214 Capsella grandiflora
Cagra.6049s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold6049: 6437-16436 Capsella grandiflora
Cagra.6049s0004 10.0kb downstream 10.0kb downstream 10778 true Scaffold6049: 16437-27214 Capsella grandiflora
Cagra.6049s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold6049: 17215-27214 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380123 5261 Brassicaceae View MSA
123836715 5264 Brassicales-Malvales View MSA
124342159 5266 SBM View MSA
124253928 5268 Malvidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain