Gene : Cagra.6321s0001 C. grandiflora v1.1
Genomic Order:  1 Name:  ? Cagra.6321s0001
Secondary Identifier:  ? PAC:28916851
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6321s0001 0.5kb upstream 0.5kb upstream 661 true Scaffold6321: 1-661 Capsella grandiflora
Cagra.6321s0001 0.5kb upstream 0.5kb upstream 280 false Scaffold6321: 1-280 Capsella grandiflora
Cagra.6321s0001 0.5kb downstream 0.5kb downstream 881 true Scaffold6321: 281-1161 Capsella grandiflora
Cagra.6321s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold6321: 662-1161 Capsella grandiflora
Cagra.6321s0001 1.0kb upstream 1.0kb upstream 661 true Scaffold6321: 1-661 Capsella grandiflora
Cagra.6321s0001 1.0kb upstream 1.0kb upstream 280 false Scaffold6321: 1-280 Capsella grandiflora
Cagra.6321s0001 1.0kb downstream 1.0kb downstream 1381 true Scaffold6321: 281-1661 Capsella grandiflora
Cagra.6321s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold6321: 662-1661 Capsella grandiflora
Cagra.6321s0001 2.0kb upstream 2.0kb upstream 661 true Scaffold6321: 1-661 Capsella grandiflora
Cagra.6321s0001 2.0kb upstream 2.0kb upstream 280 false Scaffold6321: 1-280 Capsella grandiflora
Cagra.6321s0001 2.0kb downstream 2.0kb downstream 2381 true Scaffold6321: 281-2661 Capsella grandiflora
Cagra.6321s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold6321: 662-2661 Capsella grandiflora
Cagra.6321s0001 5.0kb upstream 5.0kb upstream 661 true Scaffold6321: 1-661 Capsella grandiflora
Cagra.6321s0001 5.0kb upstream 5.0kb upstream 280 false Scaffold6321: 1-280 Capsella grandiflora
Cagra.6321s0001 5.0kb downstream 5.0kb downstream 5381 true Scaffold6321: 281-5661 Capsella grandiflora
Cagra.6321s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold6321: 662-5661 Capsella grandiflora
Cagra.6321s0001 10.0kb upstream 10.0kb upstream 661 true Scaffold6321: 1-661 Capsella grandiflora
Cagra.6321s0001 10.0kb upstream 10.0kb upstream 280 false Scaffold6321: 1-280 Capsella grandiflora
Cagra.6321s0001 10.0kb downstream 10.0kb downstream 10381 true Scaffold6321: 281-10661 Capsella grandiflora
Cagra.6321s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold6321: 662-10661 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334121 5261 Brassicaceae Singleton cluster - no MSA
123837653 5264 Brassicales-Malvales View MSA
124337723 5266 SBM View MSA
124249912 5268 Malvidae View MSA
124065245 5270 Rosid View MSA
123748532 5271 Pentapetalae View MSA
122792835 5272 Eudicot View MSA
122046009 5273 Angiosperm View MSA
121345994 5274 Embryophyte View MSA
123380304 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain