Gene : Cagra.0993s0103 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14155:SF126 - RING-H2 FINGER PROTEIN ATL70 Genomic Order:  103
Name:  ? Cagra.0993s0103 Secondary Identifier:  ? PAC:28903495
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0103 0.5kb upstream 0.5kb upstream 1401 true Scaffold993: 348893-350293 Capsella grandiflora
Cagra.0993s0103 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 349794-350293 Capsella grandiflora
Cagra.0993s0103 0.5kb downstream 0.5kb downstream 1401 true Scaffold993: 348393-349793 Capsella grandiflora
Cagra.0993s0103 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 348393-348892 Capsella grandiflora
Cagra.0993s0103 1.0kb upstream 1.0kb upstream 1901 true Scaffold993: 348893-350793 Capsella grandiflora
Cagra.0993s0103 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 349794-350793 Capsella grandiflora
Cagra.0993s0103 1.0kb downstream 1.0kb downstream 1901 true Scaffold993: 347893-349793 Capsella grandiflora
Cagra.0993s0103 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 347893-348892 Capsella grandiflora
Cagra.0993s0103 2.0kb upstream 2.0kb upstream 2901 true Scaffold993: 348893-351793 Capsella grandiflora
Cagra.0993s0103 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 349794-351793 Capsella grandiflora
Cagra.0993s0103 2.0kb downstream 2.0kb downstream 2901 true Scaffold993: 346893-349793 Capsella grandiflora
Cagra.0993s0103 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 346893-348892 Capsella grandiflora
Cagra.0993s0103 5.0kb upstream 5.0kb upstream 5901 true Scaffold993: 348893-354793 Capsella grandiflora
Cagra.0993s0103 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 349794-354793 Capsella grandiflora
Cagra.0993s0103 5.0kb downstream 5.0kb downstream 5901 true Scaffold993: 343893-349793 Capsella grandiflora
Cagra.0993s0103 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 343893-348892 Capsella grandiflora
Cagra.0993s0103 10.0kb upstream 10.0kb upstream 10901 true Scaffold993: 348893-359793 Capsella grandiflora
Cagra.0993s0103 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 349794-359793 Capsella grandiflora
Cagra.0993s0103 10.0kb downstream 10.0kb downstream 10901 true Scaffold993: 338893-349793 Capsella grandiflora
Cagra.0993s0103 10.0kb downstream 10.0kb downstream 10000 false Scaffold993: 338893-348892 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364051 5261 Brassicaceae View MSA
123837619 5264 Brassicales-Malvales View MSA
124339404 5266 SBM View MSA
124250731 5268 Malvidae View MSA
124062741 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain