Gene : Cagra.6942s0048 C. grandiflora v1.1
Genomic Order:  48 Name:  ? Cagra.6942s0048
Secondary Identifier:  ? PAC:28901241
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6942s0048 0.5kb upstream 0.5kb upstream 854 true Scaffold6942: 167226-168079 Capsella grandiflora
Cagra.6942s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold6942: 167226-167725 Capsella grandiflora
Cagra.6942s0048 0.5kb downstream 0.5kb downstream 854 true Scaffold6942: 167726-168579 Capsella grandiflora
Cagra.6942s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold6942: 168080-168579 Capsella grandiflora
Cagra.6942s0048 1.0kb upstream 1.0kb upstream 1354 true Scaffold6942: 166726-168079 Capsella grandiflora
Cagra.6942s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold6942: 166726-167725 Capsella grandiflora
Cagra.6942s0048 1.0kb downstream 1.0kb downstream 1354 true Scaffold6942: 167726-169079 Capsella grandiflora
Cagra.6942s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold6942: 168080-169079 Capsella grandiflora
Cagra.6942s0048 2.0kb upstream 2.0kb upstream 2354 true Scaffold6942: 165726-168079 Capsella grandiflora
Cagra.6942s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold6942: 165726-167725 Capsella grandiflora
Cagra.6942s0048 2.0kb downstream 2.0kb downstream 2354 true Scaffold6942: 167726-170079 Capsella grandiflora
Cagra.6942s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold6942: 168080-170079 Capsella grandiflora
Cagra.6942s0048 5.0kb upstream 5.0kb upstream 5354 true Scaffold6942: 162726-168079 Capsella grandiflora
Cagra.6942s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold6942: 162726-167725 Capsella grandiflora
Cagra.6942s0048 5.0kb downstream 5.0kb downstream 5354 true Scaffold6942: 167726-173079 Capsella grandiflora
Cagra.6942s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold6942: 168080-173079 Capsella grandiflora
Cagra.6942s0048 10.0kb upstream 10.0kb upstream 10354 true Scaffold6942: 157726-168079 Capsella grandiflora
Cagra.6942s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold6942: 157726-167725 Capsella grandiflora
Cagra.6942s0048 10.0kb downstream 10.0kb downstream 6666 true Scaffold6942: 167726-174391 Capsella grandiflora
Cagra.6942s0048 10.0kb downstream 10.0kb downstream 6312 false Scaffold6942: 168080-174391 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375497 5261 Brassicaceae View MSA
123841393 5264 Brassicales-Malvales View MSA
124322917 5266 SBM View MSA
124244502 5268 Malvidae View MSA
124070281 5270 Rosid View MSA
123751970 5271 Pentapetalae View MSA
122796079 5272 Eudicot View MSA
122050175 5273 Angiosperm View MSA
121348989 5274 Embryophyte View MSA
123381114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain