Gene : Cagra.6777s0012 C. grandiflora v1.1
Defline:  (1 of 132) PF00847 - AP2 domain (AP2) Genomic Order:  12
Name:  ? Cagra.6777s0012 Secondary Identifier:  ? PAC:28894336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6777s0012 0.5kb upstream 0.5kb upstream 1319 true Scaffold6777: 35116-36434 Capsella grandiflora
Cagra.6777s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold6777: 35935-36434 Capsella grandiflora
Cagra.6777s0012 0.5kb downstream 0.5kb downstream 1319 true Scaffold6777: 34616-35934 Capsella grandiflora
Cagra.6777s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold6777: 34616-35115 Capsella grandiflora
Cagra.6777s0012 1.0kb upstream 1.0kb upstream 1819 true Scaffold6777: 35116-36934 Capsella grandiflora
Cagra.6777s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold6777: 35935-36934 Capsella grandiflora
Cagra.6777s0012 1.0kb downstream 1.0kb downstream 1819 true Scaffold6777: 34116-35934 Capsella grandiflora
Cagra.6777s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold6777: 34116-35115 Capsella grandiflora
Cagra.6777s0012 2.0kb upstream 2.0kb upstream 2819 true Scaffold6777: 35116-37934 Capsella grandiflora
Cagra.6777s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold6777: 35935-37934 Capsella grandiflora
Cagra.6777s0012 2.0kb downstream 2.0kb downstream 2819 true Scaffold6777: 33116-35934 Capsella grandiflora
Cagra.6777s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold6777: 33116-35115 Capsella grandiflora
Cagra.6777s0012 5.0kb upstream 5.0kb upstream 5819 true Scaffold6777: 35116-40934 Capsella grandiflora
Cagra.6777s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold6777: 35935-40934 Capsella grandiflora
Cagra.6777s0012 5.0kb downstream 5.0kb downstream 5819 true Scaffold6777: 30116-35934 Capsella grandiflora
Cagra.6777s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold6777: 30116-35115 Capsella grandiflora
Cagra.6777s0012 10.0kb upstream 10.0kb upstream 10819 true Scaffold6777: 35116-45934 Capsella grandiflora
Cagra.6777s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold6777: 35935-45934 Capsella grandiflora
Cagra.6777s0012 10.0kb downstream 10.0kb downstream 10819 true Scaffold6777: 25116-35934 Capsella grandiflora
Cagra.6777s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold6777: 25116-35115 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376898 5261 Brassicaceae View MSA
123835468 5264 Brassicales-Malvales View MSA
124348988 5266 SBM View MSA
124240544 5268 Malvidae View MSA
124073164 5270 Rosid View MSA
123751106 5271 Pentapetalae View MSA
122797584 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain