Gene : Cagra.7393s0002 C. grandiflora v1.1
Defline:  (1 of 223) PF13639 - Ring finger domain (zf-RING_2) Genomic Order:  2
Name:  ? Cagra.7393s0002 Secondary Identifier:  ? PAC:28913356
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7393s0002 0.5kb upstream 0.5kb upstream 1109 true Scaffold7393: 6142-7250 Capsella grandiflora
Cagra.7393s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold7393: 6142-6641 Capsella grandiflora
Cagra.7393s0002 0.5kb downstream 0.5kb downstream 1109 true Scaffold7393: 6642-7750 Capsella grandiflora
Cagra.7393s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold7393: 7251-7750 Capsella grandiflora
Cagra.7393s0002 1.0kb upstream 1.0kb upstream 1609 true Scaffold7393: 5642-7250 Capsella grandiflora
Cagra.7393s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold7393: 5642-6641 Capsella grandiflora
Cagra.7393s0002 1.0kb downstream 1.0kb downstream 1609 true Scaffold7393: 6642-8250 Capsella grandiflora
Cagra.7393s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold7393: 7251-8250 Capsella grandiflora
Cagra.7393s0002 2.0kb upstream 2.0kb upstream 2609 true Scaffold7393: 4642-7250 Capsella grandiflora
Cagra.7393s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold7393: 4642-6641 Capsella grandiflora
Cagra.7393s0002 2.0kb downstream 2.0kb downstream 2609 true Scaffold7393: 6642-9250 Capsella grandiflora
Cagra.7393s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold7393: 7251-9250 Capsella grandiflora
Cagra.7393s0002 5.0kb upstream 5.0kb upstream 5609 true Scaffold7393: 1642-7250 Capsella grandiflora
Cagra.7393s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold7393: 1642-6641 Capsella grandiflora
Cagra.7393s0002 5.0kb downstream 5.0kb downstream 5609 true Scaffold7393: 6642-12250 Capsella grandiflora
Cagra.7393s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold7393: 7251-12250 Capsella grandiflora
Cagra.7393s0002 10.0kb upstream 10.0kb upstream 7250 true Scaffold7393: 1-7250 Capsella grandiflora
Cagra.7393s0002 10.0kb upstream 10.0kb upstream 6641 false Scaffold7393: 1-6641 Capsella grandiflora
Cagra.7393s0002 10.0kb downstream 10.0kb downstream 10609 true Scaffold7393: 6642-17250 Capsella grandiflora
Cagra.7393s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold7393: 7251-17250 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376957 5261 Brassicaceae View MSA
123801408 5264 Brassicales-Malvales View MSA
124298716 5266 SBM View MSA
124248129 5268 Malvidae View MSA
124074172 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain