Gene : Cagra.7352s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21649:SF26 - CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  8
Name:  ? Cagra.7352s0008 Secondary Identifier:  ? PAC:28911115
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7352s0008 0.5kb upstream 0.5kb upstream 1301 true Scaffold7352: 16422-17722 Capsella grandiflora
Cagra.7352s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold7352: 17223-17722 Capsella grandiflora
Cagra.7352s0008 0.5kb downstream 0.5kb downstream 1301 true Scaffold7352: 15922-17222 Capsella grandiflora
Cagra.7352s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold7352: 15922-16421 Capsella grandiflora
Cagra.7352s0008 1.0kb upstream 1.0kb upstream 1801 true Scaffold7352: 16422-18222 Capsella grandiflora
Cagra.7352s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold7352: 17223-18222 Capsella grandiflora
Cagra.7352s0008 1.0kb downstream 1.0kb downstream 1801 true Scaffold7352: 15422-17222 Capsella grandiflora
Cagra.7352s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold7352: 15422-16421 Capsella grandiflora
Cagra.7352s0008 2.0kb upstream 2.0kb upstream 2801 true Scaffold7352: 16422-19222 Capsella grandiflora
Cagra.7352s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold7352: 17223-19222 Capsella grandiflora
Cagra.7352s0008 2.0kb downstream 2.0kb downstream 2801 true Scaffold7352: 14422-17222 Capsella grandiflora
Cagra.7352s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold7352: 14422-16421 Capsella grandiflora
Cagra.7352s0008 5.0kb upstream 5.0kb upstream 5801 true Scaffold7352: 16422-22222 Capsella grandiflora
Cagra.7352s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold7352: 17223-22222 Capsella grandiflora
Cagra.7352s0008 5.0kb downstream 5.0kb downstream 5801 true Scaffold7352: 11422-17222 Capsella grandiflora
Cagra.7352s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold7352: 11422-16421 Capsella grandiflora
Cagra.7352s0008 10.0kb upstream 10.0kb upstream 10801 true Scaffold7352: 16422-27222 Capsella grandiflora
Cagra.7352s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold7352: 17223-27222 Capsella grandiflora
Cagra.7352s0008 10.0kb downstream 10.0kb downstream 10801 true Scaffold7352: 6422-17222 Capsella grandiflora
Cagra.7352s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold7352: 6422-16421 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378096 5261 Brassicaceae View MSA
123837903 5264 Brassicales-Malvales View MSA
124347417 5266 SBM View MSA
124244902 5268 Malvidae View MSA
124072480 5270 Rosid View MSA
123751711 5271 Pentapetalae View MSA
122794402 5272 Eudicot View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain