Gene : Cagra.7974s0001 C. grandiflora v1.1
Defline:  (1 of 22) PF08263//PF13855 - Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  1
Name:  ? Cagra.7974s0001 Secondary Identifier:  ? PAC:28905479
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7974s0001 0.5kb upstream 0.5kb upstream 1160 true Scaffold7974: 1-1160 Capsella grandiflora
Cagra.7974s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold7974: 1-2 Capsella grandiflora
Cagra.7974s0001 0.5kb downstream 0.5kb downstream 1658 true Scaffold7974: 3-1660 Capsella grandiflora
Cagra.7974s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold7974: 1161-1660 Capsella grandiflora
Cagra.7974s0001 1.0kb upstream 1.0kb upstream 1160 true Scaffold7974: 1-1160 Capsella grandiflora
Cagra.7974s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold7974: 1-2 Capsella grandiflora
Cagra.7974s0001 1.0kb downstream 1.0kb downstream 2158 true Scaffold7974: 3-2160 Capsella grandiflora
Cagra.7974s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold7974: 1161-2160 Capsella grandiflora
Cagra.7974s0001 2.0kb upstream 2.0kb upstream 1160 true Scaffold7974: 1-1160 Capsella grandiflora
Cagra.7974s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold7974: 1-2 Capsella grandiflora
Cagra.7974s0001 2.0kb downstream 2.0kb downstream 3158 true Scaffold7974: 3-3160 Capsella grandiflora
Cagra.7974s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold7974: 1161-3160 Capsella grandiflora
Cagra.7974s0001 5.0kb upstream 5.0kb upstream 1160 true Scaffold7974: 1-1160 Capsella grandiflora
Cagra.7974s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold7974: 1-2 Capsella grandiflora
Cagra.7974s0001 5.0kb downstream 5.0kb downstream 6158 true Scaffold7974: 3-6160 Capsella grandiflora
Cagra.7974s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold7974: 1161-6160 Capsella grandiflora
Cagra.7974s0001 10.0kb upstream 10.0kb upstream 1160 true Scaffold7974: 1-1160 Capsella grandiflora
Cagra.7974s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold7974: 1-2 Capsella grandiflora
Cagra.7974s0001 10.0kb downstream 10.0kb downstream 11158 true Scaffold7974: 3-11160 Capsella grandiflora
Cagra.7974s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold7974: 1161-11160 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380256 5261 Brassicaceae View MSA
123841348 5264 Brassicales-Malvales View MSA
124350581 5266 SBM View MSA
124254554 5268 Malvidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain