Gene : Cagra.7888s0004 C. grandiflora v1.1
Defline:  (1 of 6) PF05340 - Protein of unknown function (DUF740) (DUF740) Genomic Order:  4
Name:  ? Cagra.7888s0004 Secondary Identifier:  ? PAC:28911848
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7888s0004 0.5kb upstream 0.5kb upstream 2616 true Scaffold7888: 11140-13755 Capsella grandiflora
Cagra.7888s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold7888: 13256-13755 Capsella grandiflora
Cagra.7888s0004 0.5kb downstream 0.5kb downstream 2616 true Scaffold7888: 10640-13255 Capsella grandiflora
Cagra.7888s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold7888: 10640-11139 Capsella grandiflora
Cagra.7888s0004 1.0kb upstream 1.0kb upstream 3116 true Scaffold7888: 11140-14255 Capsella grandiflora
Cagra.7888s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold7888: 13256-14255 Capsella grandiflora
Cagra.7888s0004 1.0kb downstream 1.0kb downstream 3116 true Scaffold7888: 10140-13255 Capsella grandiflora
Cagra.7888s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold7888: 10140-11139 Capsella grandiflora
Cagra.7888s0004 2.0kb upstream 2.0kb upstream 4116 true Scaffold7888: 11140-15255 Capsella grandiflora
Cagra.7888s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold7888: 13256-15255 Capsella grandiflora
Cagra.7888s0004 2.0kb downstream 2.0kb downstream 4116 true Scaffold7888: 9140-13255 Capsella grandiflora
Cagra.7888s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold7888: 9140-11139 Capsella grandiflora
Cagra.7888s0004 5.0kb upstream 5.0kb upstream 7116 true Scaffold7888: 11140-18255 Capsella grandiflora
Cagra.7888s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold7888: 13256-18255 Capsella grandiflora
Cagra.7888s0004 5.0kb downstream 5.0kb downstream 7116 true Scaffold7888: 6140-13255 Capsella grandiflora
Cagra.7888s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold7888: 6140-11139 Capsella grandiflora
Cagra.7888s0004 10.0kb upstream 10.0kb upstream 12116 true Scaffold7888: 11140-23255 Capsella grandiflora
Cagra.7888s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold7888: 13256-23255 Capsella grandiflora
Cagra.7888s0004 10.0kb downstream 10.0kb downstream 12116 true Scaffold7888: 1140-13255 Capsella grandiflora
Cagra.7888s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold7888: 1140-11139 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374439 5261 Brassicaceae View MSA
123800759 5264 Brassicales-Malvales View MSA
124298132 5266 SBM View MSA
124149854 5268 Malvidae View MSA
123875580 5270 Rosid View MSA
123459379 5271 Pentapetalae View MSA
122494770 5272 Eudicot View MSA
122051707 5273 Angiosperm View MSA
121312622 5274 Embryophyte View MSA
123349777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain