Gene : Cagra.9217s0015 C. grandiflora v1.1
Defline:  (1 of 34) PTHR31232:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATED Genomic Order:  15
Name:  ? Cagra.9217s0015 Secondary Identifier:  ? PAC:28914546
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9217s0015 0.5kb upstream 0.5kb upstream 911 true Scaffold9217: 56832-57742 Capsella grandiflora
Cagra.9217s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold9217: 56832-57331 Capsella grandiflora
Cagra.9217s0015 0.5kb downstream 0.5kb downstream 911 true Scaffold9217: 57332-58242 Capsella grandiflora
Cagra.9217s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold9217: 57743-58242 Capsella grandiflora
Cagra.9217s0015 1.0kb upstream 1.0kb upstream 1411 true Scaffold9217: 56332-57742 Capsella grandiflora
Cagra.9217s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold9217: 56332-57331 Capsella grandiflora
Cagra.9217s0015 1.0kb downstream 1.0kb downstream 1411 true Scaffold9217: 57332-58742 Capsella grandiflora
Cagra.9217s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold9217: 57743-58742 Capsella grandiflora
Cagra.9217s0015 2.0kb upstream 2.0kb upstream 2411 true Scaffold9217: 55332-57742 Capsella grandiflora
Cagra.9217s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold9217: 55332-57331 Capsella grandiflora
Cagra.9217s0015 2.0kb downstream 2.0kb downstream 2411 true Scaffold9217: 57332-59742 Capsella grandiflora
Cagra.9217s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold9217: 57743-59742 Capsella grandiflora
Cagra.9217s0015 5.0kb upstream 5.0kb upstream 5411 true Scaffold9217: 52332-57742 Capsella grandiflora
Cagra.9217s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold9217: 52332-57331 Capsella grandiflora
Cagra.9217s0015 5.0kb downstream 5.0kb downstream 5411 true Scaffold9217: 57332-62742 Capsella grandiflora
Cagra.9217s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold9217: 57743-62742 Capsella grandiflora
Cagra.9217s0015 10.0kb upstream 10.0kb upstream 10411 true Scaffold9217: 47332-57742 Capsella grandiflora
Cagra.9217s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold9217: 47332-57331 Capsella grandiflora
Cagra.9217s0015 10.0kb downstream 10.0kb downstream 10411 true Scaffold9217: 57332-67742 Capsella grandiflora
Cagra.9217s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold9217: 57743-67742 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378479 5261 Brassicaceae View MSA
123801879 5264 Brassicales-Malvales View MSA
124299132 5266 SBM View MSA
124252657 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain