Gene : Cagra.9143s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22814:SF136 - HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.9143s0001 Secondary Identifier:  ? PAC:28907557
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9143s0001 0.5kb upstream 0.5kb upstream 287 true Scaffold9143: 944-1230 Capsella grandiflora
Cagra.9143s0001 0.5kb upstream 0.5kb upstream 5 false Scaffold9143: 1226-1230 Capsella grandiflora
Cagra.9143s0001 0.5kb downstream 0.5kb downstream 782 true Scaffold9143: 444-1225 Capsella grandiflora
Cagra.9143s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9143: 444-943 Capsella grandiflora
Cagra.9143s0001 1.0kb upstream 1.0kb upstream 287 true Scaffold9143: 944-1230 Capsella grandiflora
Cagra.9143s0001 1.0kb upstream 1.0kb upstream 5 false Scaffold9143: 1226-1230 Capsella grandiflora
Cagra.9143s0001 1.0kb downstream 1.0kb downstream 1225 true Scaffold9143: 1-1225 Capsella grandiflora
Cagra.9143s0001 1.0kb downstream 1.0kb downstream 943 false Scaffold9143: 1-943 Capsella grandiflora
Cagra.9143s0001 2.0kb upstream 2.0kb upstream 287 true Scaffold9143: 944-1230 Capsella grandiflora
Cagra.9143s0001 2.0kb upstream 2.0kb upstream 5 false Scaffold9143: 1226-1230 Capsella grandiflora
Cagra.9143s0001 2.0kb downstream 2.0kb downstream 1225 true Scaffold9143: 1-1225 Capsella grandiflora
Cagra.9143s0001 2.0kb downstream 2.0kb downstream 943 false Scaffold9143: 1-943 Capsella grandiflora
Cagra.9143s0001 5.0kb upstream 5.0kb upstream 287 true Scaffold9143: 944-1230 Capsella grandiflora
Cagra.9143s0001 5.0kb upstream 5.0kb upstream 5 false Scaffold9143: 1226-1230 Capsella grandiflora
Cagra.9143s0001 5.0kb downstream 5.0kb downstream 1225 true Scaffold9143: 1-1225 Capsella grandiflora
Cagra.9143s0001 5.0kb downstream 5.0kb downstream 943 false Scaffold9143: 1-943 Capsella grandiflora
Cagra.9143s0001 10.0kb upstream 10.0kb upstream 287 true Scaffold9143: 944-1230 Capsella grandiflora
Cagra.9143s0001 10.0kb upstream 10.0kb upstream 5 false Scaffold9143: 1226-1230 Capsella grandiflora
Cagra.9143s0001 10.0kb downstream 10.0kb downstream 1225 true Scaffold9143: 1-1225 Capsella grandiflora
Cagra.9143s0001 10.0kb downstream 10.0kb downstream 943 false Scaffold9143: 1-943 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334481 5261 Brassicaceae Singleton cluster - no MSA
123838104 5264 Brassicales-Malvales View MSA
124322398 5266 SBM View MSA
124169133 5268 Malvidae View MSA
124067944 5270 Rosid View MSA
123745345 5271 Pentapetalae View MSA
122793505 5272 Eudicot View MSA
122047069 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain