Gene : Cagra.9553s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11157:SF13 - PROTEIN ELO-8, ISOFORM A Genomic Order:  2
Name:  ? Cagra.9553s0002 Secondary Identifier:  ? PAC:28914932
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5080 Capsella grandiflora pathologic  
Cgrandiflora PWY-6433 Capsella grandiflora pathologic  
Cgrandiflora PWY-6598 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-7601 Capsella grandiflora pathologic  
Cgrandiflora PWY-7619 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9553s0002 0.5kb upstream 0.5kb upstream 1397 true Scaffold9553: 3449-4845 Capsella grandiflora
Cagra.9553s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold9553: 3449-3948 Capsella grandiflora
Cagra.9553s0002 0.5kb downstream 0.5kb downstream 1397 true Scaffold9553: 3949-5345 Capsella grandiflora
Cagra.9553s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold9553: 4846-5345 Capsella grandiflora
Cagra.9553s0002 1.0kb upstream 1.0kb upstream 1897 true Scaffold9553: 2949-4845 Capsella grandiflora
Cagra.9553s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold9553: 2949-3948 Capsella grandiflora
Cagra.9553s0002 1.0kb downstream 1.0kb downstream 1897 true Scaffold9553: 3949-5845 Capsella grandiflora
Cagra.9553s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold9553: 4846-5845 Capsella grandiflora
Cagra.9553s0002 2.0kb upstream 2.0kb upstream 2897 true Scaffold9553: 1949-4845 Capsella grandiflora
Cagra.9553s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold9553: 1949-3948 Capsella grandiflora
Cagra.9553s0002 2.0kb downstream 2.0kb downstream 2897 true Scaffold9553: 3949-6845 Capsella grandiflora
Cagra.9553s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold9553: 4846-6845 Capsella grandiflora
Cagra.9553s0002 5.0kb upstream 5.0kb upstream 4845 true Scaffold9553: 1-4845 Capsella grandiflora
Cagra.9553s0002 5.0kb upstream 5.0kb upstream 3948 false Scaffold9553: 1-3948 Capsella grandiflora
Cagra.9553s0002 5.0kb downstream 5.0kb downstream 5897 true Scaffold9553: 3949-9845 Capsella grandiflora
Cagra.9553s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold9553: 4846-9845 Capsella grandiflora
Cagra.9553s0002 10.0kb upstream 10.0kb upstream 4845 true Scaffold9553: 1-4845 Capsella grandiflora
Cagra.9553s0002 10.0kb upstream 10.0kb upstream 3948 false Scaffold9553: 1-3948 Capsella grandiflora
Cagra.9553s0002 10.0kb downstream 10.0kb downstream 10897 true Scaffold9553: 3949-14845 Capsella grandiflora
Cagra.9553s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold9553: 4846-14845 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343503 5261 Brassicaceae View MSA
123783684 5264 Brassicales-Malvales View MSA
124281902 5266 SBM View MSA
124136578 5268 Malvidae View MSA
123864417 5270 Rosid View MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain