Gene : Cagra.9440s0001 C. grandiflora v1.1
Defline:  (1 of 5) PTHR23070:SF5 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.9440s0001 Secondary Identifier:  ? PAC:28903287
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9440s0001 0.5kb upstream 0.5kb upstream 2039 true Scaffold9440: 1387-3425 Capsella grandiflora
Cagra.9440s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold9440: 1387-1886 Capsella grandiflora
Cagra.9440s0001 0.5kb downstream 0.5kb downstream 2039 true Scaffold9440: 1887-3925 Capsella grandiflora
Cagra.9440s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9440: 3426-3925 Capsella grandiflora
Cagra.9440s0001 1.0kb upstream 1.0kb upstream 2539 true Scaffold9440: 887-3425 Capsella grandiflora
Cagra.9440s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold9440: 887-1886 Capsella grandiflora
Cagra.9440s0001 1.0kb downstream 1.0kb downstream 2539 true Scaffold9440: 1887-4425 Capsella grandiflora
Cagra.9440s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold9440: 3426-4425 Capsella grandiflora
Cagra.9440s0001 2.0kb upstream 2.0kb upstream 3425 true Scaffold9440: 1-3425 Capsella grandiflora
Cagra.9440s0001 2.0kb upstream 2.0kb upstream 1886 false Scaffold9440: 1-1886 Capsella grandiflora
Cagra.9440s0001 2.0kb downstream 2.0kb downstream 3539 true Scaffold9440: 1887-5425 Capsella grandiflora
Cagra.9440s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold9440: 3426-5425 Capsella grandiflora
Cagra.9440s0001 5.0kb upstream 5.0kb upstream 3425 true Scaffold9440: 1-3425 Capsella grandiflora
Cagra.9440s0001 5.0kb upstream 5.0kb upstream 1886 false Scaffold9440: 1-1886 Capsella grandiflora
Cagra.9440s0001 5.0kb downstream 5.0kb downstream 3969 true Scaffold9440: 1887-5855 Capsella grandiflora
Cagra.9440s0001 5.0kb downstream 5.0kb downstream 2430 false Scaffold9440: 3426-5855 Capsella grandiflora
Cagra.9440s0001 10.0kb upstream 10.0kb upstream 3425 true Scaffold9440: 1-3425 Capsella grandiflora
Cagra.9440s0001 10.0kb upstream 10.0kb upstream 1886 false Scaffold9440: 1-1886 Capsella grandiflora
Cagra.9440s0001 10.0kb downstream 10.0kb downstream 3969 true Scaffold9440: 1887-5855 Capsella grandiflora
Cagra.9440s0001 10.0kb downstream 10.0kb downstream 2430 false Scaffold9440: 3426-5855 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794526 5272 Eudicot View MSA
122374032 5261 Brassicaceae View MSA
123838716 5264 Brassicales-Malvales View MSA
124341066 5266 SBM View MSA
124247852 5268 Malvidae View MSA
124072543 5270 Rosid View MSA
123751074 5271 Pentapetalae View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain