Gene : Cagra.9338s0001 C. grandiflora v1.1
Defline:  (1 of 9) PTHR24420//PTHR24420:SF937 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE Genomic Order:  1
Name:  ? Cagra.9338s0001 Secondary Identifier:  ? PAC:28909968
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9338s0001 0.5kb upstream 0.5kb upstream 1724 true Scaffold9338: 1107-2830 Capsella grandiflora
Cagra.9338s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold9338: 2331-2830 Capsella grandiflora
Cagra.9338s0001 0.5kb downstream 0.5kb downstream 1724 true Scaffold9338: 607-2330 Capsella grandiflora
Cagra.9338s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9338: 607-1106 Capsella grandiflora
Cagra.9338s0001 1.0kb upstream 1.0kb upstream 2224 true Scaffold9338: 1107-3330 Capsella grandiflora
Cagra.9338s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold9338: 2331-3330 Capsella grandiflora
Cagra.9338s0001 1.0kb downstream 1.0kb downstream 2224 true Scaffold9338: 107-2330 Capsella grandiflora
Cagra.9338s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold9338: 107-1106 Capsella grandiflora
Cagra.9338s0001 2.0kb upstream 2.0kb upstream 3224 true Scaffold9338: 1107-4330 Capsella grandiflora
Cagra.9338s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold9338: 2331-4330 Capsella grandiflora
Cagra.9338s0001 2.0kb downstream 2.0kb downstream 2330 true Scaffold9338: 1-2330 Capsella grandiflora
Cagra.9338s0001 2.0kb downstream 2.0kb downstream 1106 false Scaffold9338: 1-1106 Capsella grandiflora
Cagra.9338s0001 5.0kb upstream 5.0kb upstream 6224 true Scaffold9338: 1107-7330 Capsella grandiflora
Cagra.9338s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold9338: 2331-7330 Capsella grandiflora
Cagra.9338s0001 5.0kb downstream 5.0kb downstream 2330 true Scaffold9338: 1-2330 Capsella grandiflora
Cagra.9338s0001 5.0kb downstream 5.0kb downstream 1106 false Scaffold9338: 1-1106 Capsella grandiflora
Cagra.9338s0001 10.0kb upstream 10.0kb upstream 6829 true Scaffold9338: 1107-7935 Capsella grandiflora
Cagra.9338s0001 10.0kb upstream 10.0kb upstream 5605 false Scaffold9338: 2331-7935 Capsella grandiflora
Cagra.9338s0001 10.0kb downstream 10.0kb downstream 2330 true Scaffold9338: 1-2330 Capsella grandiflora
Cagra.9338s0001 10.0kb downstream 10.0kb downstream 1106 false Scaffold9338: 1-1106 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376291 5261 Brassicaceae View MSA
123833764 5264 Brassicales-Malvales View MSA
124343236 5266 SBM View MSA
124250538 5268 Malvidae View MSA
124072972 5270 Rosid View MSA
123750423 5271 Pentapetalae View MSA
122791273 5272 Eudicot View MSA
122042283 5273 Angiosperm View MSA
121309946 5274 Embryophyte View MSA
123347571 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain