Gene : MD16G1255600 M. domestica v1.1

Defline:  (1 of 8) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Genomic Order:  2204
Name:  ? MD16G1255600 Secondary Identifier:  ? PAC:40108619

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MD16G1255600 0.5kb upstream 0.5kb upstream 2744 true Chr16: 29391803-29394546 Malus domestica
MD16G1255600 0.5kb upstream 0.5kb upstream 500 false Chr16: 29391803-29392302 Malus domestica
MD16G1255600 0.5kb downstream 0.5kb downstream 2744 true Chr16: 29392303-29395046 Malus domestica
MD16G1255600 0.5kb downstream 0.5kb downstream 500 false Chr16: 29394547-29395046 Malus domestica
MD16G1255600 1.0kb upstream 1.0kb upstream 3244 true Chr16: 29391303-29394546 Malus domestica
MD16G1255600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 29391303-29392302 Malus domestica
MD16G1255600 1.0kb downstream 1.0kb downstream 3244 true Chr16: 29392303-29395546 Malus domestica
MD16G1255600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 29394547-29395546 Malus domestica
MD16G1255600 2.0kb upstream 2.0kb upstream 4244 true Chr16: 29390303-29394546 Malus domestica
MD16G1255600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 29390303-29392302 Malus domestica
MD16G1255600 2.0kb downstream 2.0kb downstream 4244 true Chr16: 29392303-29396546 Malus domestica
MD16G1255600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 29394547-29396546 Malus domestica
MD16G1255600 5.0kb upstream 5.0kb upstream 7244 true Chr16: 29387303-29394546 Malus domestica
MD16G1255600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 29387303-29392302 Malus domestica
MD16G1255600 5.0kb downstream 5.0kb downstream 7244 true Chr16: 29392303-29399546 Malus domestica
MD16G1255600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 29394547-29399546 Malus domestica
MD16G1255600 10.0kb upstream 10.0kb upstream 12244 true Chr16: 29382303-29394546 Malus domestica
MD16G1255600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 29382303-29392302 Malus domestica
MD16G1255600 10.0kb downstream 10.0kb downstream 12244 true Chr16: 29392303-29404546 Malus domestica
MD16G1255600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 29394547-29404546 Malus domestica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309903 5265 Fabidae View MSA
124065938 5270 Rosid View MSA
123738887 5271 Pentapetalae View MSA
122785902 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain