Gene : MD17G1260500 M. domestica v1.1
Defline:  (1 of 5) K13789 - geranylgeranyl diphosphate synthase, type II (GGPS) Genomic Order:  2246
Name:  ? MD17G1260500 Secondary Identifier:  ? PAC:40124879
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mdomestica PWY-5120 Malus domestica pathologic  
Mdomestica PWY-5910 Malus domestica pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MD17G1260500 0.5kb upstream 0.5kb upstream 1578 true Chr17: 32092114-32093691 Malus domestica
MD17G1260500 0.5kb upstream 0.5kb upstream 500 false Chr17: 32092114-32092613 Malus domestica
MD17G1260500 0.5kb downstream 0.5kb downstream 1578 true Chr17: 32092614-32094191 Malus domestica
MD17G1260500 0.5kb downstream 0.5kb downstream 500 false Chr17: 32093692-32094191 Malus domestica
MD17G1260500 1.0kb upstream 1.0kb upstream 2078 true Chr17: 32091614-32093691 Malus domestica
MD17G1260500 1.0kb upstream 1.0kb upstream 1000 false Chr17: 32091614-32092613 Malus domestica
MD17G1260500 1.0kb downstream 1.0kb downstream 2078 true Chr17: 32092614-32094691 Malus domestica
MD17G1260500 1.0kb downstream 1.0kb downstream 1000 false Chr17: 32093692-32094691 Malus domestica
MD17G1260500 2.0kb upstream 2.0kb upstream 3078 true Chr17: 32090614-32093691 Malus domestica
MD17G1260500 2.0kb upstream 2.0kb upstream 2000 false Chr17: 32090614-32092613 Malus domestica
MD17G1260500 2.0kb downstream 2.0kb downstream 3078 true Chr17: 32092614-32095691 Malus domestica
MD17G1260500 2.0kb downstream 2.0kb downstream 2000 false Chr17: 32093692-32095691 Malus domestica
MD17G1260500 5.0kb upstream 5.0kb upstream 6078 true Chr17: 32087614-32093691 Malus domestica
MD17G1260500 5.0kb upstream 5.0kb upstream 5000 false Chr17: 32087614-32092613 Malus domestica
MD17G1260500 5.0kb downstream 5.0kb downstream 6078 true Chr17: 32092614-32098691 Malus domestica
MD17G1260500 5.0kb downstream 5.0kb downstream 5000 false Chr17: 32093692-32098691 Malus domestica
MD17G1260500 10.0kb upstream 10.0kb upstream 11078 true Chr17: 32082614-32093691 Malus domestica
MD17G1260500 10.0kb upstream 10.0kb upstream 10000 false Chr17: 32082614-32092613 Malus domestica
MD17G1260500 10.0kb downstream 10.0kb downstream 11078 true Chr17: 32092614-32103691 Malus domestica
MD17G1260500 10.0kb downstream 10.0kb downstream 10000 false Chr17: 32093692-32103691 Malus domestica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122212924 5265 Fabidae Singleton cluster - no MSA
124051358 5270 Rosid View MSA
123745518 5271 Pentapetalae View MSA
122795597 5272 Eudicot View MSA
122051071 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain